RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SPATA1Q5VX52 437 aa16.02■□□□□ 0.16
LDB3-207ENST00000542786 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
LDB3-207ENST00000542786 CCDC150Q8NCX0 1101 aa16.02■□□□□ 0.16
LDB3-207ENST00000542786 GMCL1Q96IK5 515 aa16.02■□□□□ 0.16
LDB3-207ENST00000542786 ZBED3Q96IU2 234 aaPredicted RBP16.02■□□□□ 0.16
LDB3-207ENST00000542786 SLC37A4O43826 429 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 KLRC4O43908 158 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 GDF11O95390 407 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 TBX2Q13207 712 aaPredicted RBP16.01■□□□□ 0.15
LDB3-207ENST00000542786 QRICH1Q2TAL8 776 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 LARGE2Q8N3Y3 721 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 ZNF70Q9UC06 446 aaPredicted RBP16.01■□□□□ 0.15
LDB3-207ENST00000542786 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 TDP2O95551 362 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 NDUFB10O96000 172 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 SERPINC1P01008 464 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 RPN1P04843 607 aaKnown RBP16.01■□□□□ 0.15
LDB3-207ENST00000542786 SKILP12757 684 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
LDB3-207ENST00000542786 UBE2SQ16763 222 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 RRAGBQ5VZM2 374 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 MTMR14Q8NCE2 650 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 SYNPO2Q9UMS6 1093 aa16.01■□□□□ 0.15
LDB3-207ENST00000542786 F5H6K3 240 aa16■□□□□ 0.15
LDB3-207ENST00000542786 GH2P01242 217 aa16■□□□□ 0.15
LDB3-207ENST00000542786 PLCG1P19174 1290 aa16■□□□□ 0.15
LDB3-207ENST00000542786 UBA7P41226 1012 aa16■□□□□ 0.15
LDB3-207ENST00000542786 SLC1A4P43007 532 aa16■□□□□ 0.15
LDB3-207ENST00000542786 KLRC3Q07444 240 aa16■□□□□ 0.15
LDB3-207ENST00000542786 CSRNP1Q96S65 589 aa16■□□□□ 0.15
LDB3-207ENST00000542786 TRIM34Q9BYJ4 488 aa16■□□□□ 0.15
LDB3-207ENST00000542786 CUEDC2Q9H467 287 aa16■□□□□ 0.15
LDB3-207ENST00000542786 PGAP2Q9UHJ9 254 aa16■□□□□ 0.15
LDB3-207ENST00000542786 HERC5Q9UII4 1024 aaKnown RBP16■□□□□ 0.15
LDB3-207ENST00000542786 BRCA1P38398 1863 aaKnown RBP16■□□□□ 0.15
LDB3-207ENST00000542786 A0A1B0GTH6 734 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 A0A1W2PRG0 241 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 MYL1P05976 194 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 TPM2P07951 284 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 KCNJ6P48051 423 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 SF3B2Q13435 895 aaKnown RBP15.99■□□□□ 0.15
LDB3-207ENST00000542786 DHX8Q14562 1220 aaKnown RBP15.99■□□□□ 0.15
LDB3-207ENST00000542786 KCNB1Q14721 858 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 ZNF658Q5TYW1 1059 aaPredicted RBP15.99■□□□□ 0.15
LDB3-207ENST00000542786 FKBP1CQ5VVH2 108 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 PPP4R3AQ6IN85 833 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 BTNL9Q6UXG8 535 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 CABP7Q86V35 215 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 FAM151AQ8WW52 585 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 CUL5Q93034 780 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 MAGEF1Q9HAY2 307 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 ZNRF3Q9ULT6 936 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 SEMA3FQ13275 785 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 NR1I3Q14994 352 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 CDC37Q16543 378 aaPredicted RBP15.99■□□□□ 0.15
LDB3-207ENST00000542786 NUP88Q99567 741 aaPredicted RBP15.99■□□□□ 0.15
LDB3-207ENST00000542786 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 RMND1Q9NWS8 449 aa15.99■□□□□ 0.15
LDB3-207ENST00000542786 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
LDB3-207ENST00000542786 MYH7BA7E2Y1 1941 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 FER1L6Q2WGJ9 1857 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 CLRN2A0PK11 232 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 USP27XA6NNY8 438 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 TCP10L2B9ZVM9 353 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 MRPL12P52815 198 aaKnown RBP15.98■□□□□ 0.15
LDB3-207ENST00000542786 STX17P56962 302 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 DLGAP5Q15398 846 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 CALCRLQ16602 461 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 HSP90AA4PQ58FG1 418 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 RBM26Q5T8P6 1007 aaKnown RBP15.98■□□□□ 0.15
LDB3-207ENST00000542786 KLHL10Q6JEL2 608 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 AGBL3Q8NEM8 1001 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 CRYGNQ8WXF5 182 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 P2RX7Q99572 595 aaKnown RBP15.98■□□□□ 0.15
LDB3-207ENST00000542786 RWDD2AQ9UIY3 292 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 CTNND2Q9UQB3 1225 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 GDAQ9Y2T3 454 aa15.98■□□□□ 0.15
LDB3-207ENST00000542786 RHOBTB3O94955 611 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 PBX1P40424 430 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 TECP42680 631 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 TNNI2P48788 182 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 MMP14P50281 582 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 GRB10Q13322 594 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 HAS1Q92839 578 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 MBOAT7Q96N66 472 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 PNMA5Q96PV4 448 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 SFPQP23246 707 aaKnown RBP eCLIP15.97■□□□□ 0.15
LDB3-207ENST00000542786 TGFB2P61812 414 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 PTPN21Q16825 1174 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 KMT5BQ4FZB7 885 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 KIAA1755Q5JYT7 1200 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 SYDE2Q5VT97 1194 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 CDAN1Q8IWY9 1227 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 ADSSL1Q8N142 457 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 CCAR2Q8N163 923 aaKnown RBP15.97■□□□□ 0.15
LDB3-207ENST00000542786 PRIMPOLQ96LW4 560 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 PLIN2Q99541 437 aa15.97■□□□□ 0.15
LDB3-207ENST00000542786 C7orf25Q9BPX7 421 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms