RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 DCAF15Q66K64 600 aa10.64□□□□□ -0.71
TTC39C-203ENST00000540918 DHX36Q9H2U1 1008 aaKnown RBP10.64□□□□□ -0.71
TTC39C-203ENST00000540918 PCDHAC2Q9Y5I4 1007 aa10.64□□□□□ -0.71
TTC39C-203ENST00000540918 CYLC1P35663 651 aaPredicted RBP10.64□□□□□ -0.71
TTC39C-203ENST00000540918 KIF5AQ12840 1032 aa10.64□□□□□ -0.71
TTC39C-203ENST00000540918 LLGL1Q15334 1064 aa10.64□□□□□ -0.71
TTC39C-203ENST00000540918 SYDE2Q5VT97 1194 aa10.64□□□□□ -0.71
TTC39C-203ENST00000540918 SWAP70Q9UH65 585 aa10.64□□□□□ -0.71
TTC39C-203ENST00000540918 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.64□□□□□ -0.71
TTC39C-203ENST00000540918 UBR1Q8IWV7 1749 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 STAT3P40763 770 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 RRAGAQ7L523 313 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 PRMT6Q96LA8 375 aaPredicted RBP10.63□□□□□ -0.71
TTC39C-203ENST00000540918 MLXIPQ9HAP2 919 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 KRT5P13647 590 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 QRICH1Q2TAL8 776 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 TYW1BQ6NUM6 668 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 FOXP4Q8IVH2 680 aaPredicted RBP10.63□□□□□ -0.71
TTC39C-203ENST00000540918 BCCIPQ9P287 314 aaKnown RBP eCLIP10.63□□□□□ -0.71
TTC39C-203ENST00000540918 PRR29P0C7W0 189 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 CA8P35219 290 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 MORC3Q14149 939 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 MICALL2Q8IY33 904 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 ADGRF4Q8IZF3 695 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 TDRD7Q8NHU6 1098 aaKnown RBP10.63□□□□□ -0.71
TTC39C-203ENST00000540918 SYNCQ9H7C4 482 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 PANK4Q9NVE7 773 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 FRMD4BQ9Y2L6 1034 aa10.63□□□□□ -0.71
TTC39C-203ENST00000540918 MRPL11Q9Y3B7 192 aaKnown RBP10.63□□□□□ -0.71
TTC39C-203ENST00000540918 KCNJ18B7U540 433 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 PCP11498 1178 aaKnown RBP10.62□□□□□ -0.71
TTC39C-203ENST00000540918 CNGA1P29973 690 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 CUL4BQ13620 913 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 KCNJ12Q14500 433 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 ZNF577Q9BSK1 485 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 TNS2Q63HR2 1409 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 POTEDQ86YR6 584 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 CRAMP1Q96RY5 1269 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 PCIF1Q9H4Z3 704 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 CNOT7Q9UIV1 285 aaKnown RBP10.62□□□□□ -0.71
TTC39C-203ENST00000540918 MAN1B1Q9UKM7 699 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 DCCP43146 1447 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 TRIM49BA6NDI0 452 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 FGFR2P21802 821 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 SLC30A10Q6XR72 485 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 GDAP1L1Q96MZ0 367 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 BCL2L12Q9HB09 334 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.62□□□□□ -0.71
TTC39C-203ENST00000540918 HPS5Q9UPZ3 1129 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 RPAP1Q9BWH6 1393 aaPredicted RBP10.62□□□□□ -0.71
TTC39C-203ENST00000540918 KIF20BQ96Q89 1820 aa10.62□□□□□ -0.71
TTC39C-203ENST00000540918 A0A1W2PQ27 194 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 A0A1W2PQ64 194 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 A0A1W2PQD8 194 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 DLATP10515 647 aaKnown RBP10.61□□□□□ -0.71
TTC39C-203ENST00000540918 NEFHP12036 1026 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 RASA1P20936 1047 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 ALX1Q15699 326 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 PFKFB3Q16875 520 aaPredicted RBP10.61□□□□□ -0.71
TTC39C-203ENST00000540918 TMEM179Q6ZVK1 233 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 NEURL4Q96JN8 1562 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 ALS2CR12Q96Q35 445 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 FNBP1Q96RU3 617 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 MPHOSPH6Q99547 160 aaKnown RBP10.61□□□□□ -0.71
TTC39C-203ENST00000540918 BHMT2Q9H2M3 363 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 FBXO28Q9NVF7 368 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 PNPLA7Q6ZV29 1317 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 B4DLN1 442 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 SRGNP10124 158 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 MARK3P27448 753 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 FAM26FQ5R3K3 315 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 ODR4Q5SWX8 454 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 SHC4Q6S5L8 630 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 CACTINQ8WUQ7 758 aaKnown RBP10.61□□□□□ -0.71
TTC39C-203ENST00000540918 TBC1D5Q92609 795 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 LARP4BQ92615 738 aaKnown RBP10.61□□□□□ -0.71
TTC39C-203ENST00000540918 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 OSBPL5Q9H0X9 879 aaPredicted RBP10.61□□□□□ -0.71
TTC39C-203ENST00000540918 KIF2AO00139 706 aaPredicted RBP10.61□□□□□ -0.71
TTC39C-203ENST00000540918 KRT19P08727 400 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 EPB41P11171 864 aaKnown RBP10.61□□□□□ -0.71
TTC39C-203ENST00000540918 HMGCS2P54868 508 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 FAM47CQ5HY64 1035 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 NBPF11Q86T75 865 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 FAM178BQ8IXR5 827 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 RNF169Q8NCN4 708 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 ANO3Q9BYT9 981 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 ACBD3Q9H3P7 528 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 AZI2Q9H6S1 392 aa10.61□□□□□ -0.71
TTC39C-203ENST00000540918 PNMA6FA0A0J9YX94 578 aa10.6□□□□□ -0.71
TTC39C-203ENST00000540918 FSD2A1L4K1 749 aa10.6□□□□□ -0.71
TTC39C-203ENST00000540918 E9PMD0 336 aa10.6□□□□□ -0.71
TTC39C-203ENST00000540918 PPP6R2O75170 966 aa10.6□□□□□ -0.71
TTC39C-203ENST00000540918 ERLIN1O75477 346 aa10.6□□□□□ -0.71
TTC39C-203ENST00000540918 CTNNA2P26232 953 aa10.6□□□□□ -0.71
TTC39C-203ENST00000540918 RPL13P26373 211 aaKnown RBP10.6□□□□□ -0.71
TTC39C-203ENST00000540918 CDR1P51861 262 aa10.6□□□□□ -0.71
TTC39C-203ENST00000540918 TSGA10IPQ3SY00 556 aa10.6□□□□□ -0.71
TTC39C-203ENST00000540918 SPECC1LQ69YQ0 1117 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms