RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 CCDC69A6NI79 296 aa17.62■□□□□ 0.41
SRRM4-202ENST00000537597 PLEKHA8P1O95397 391 aa17.62■□□□□ 0.41
SRRM4-202ENST00000537597 PGK2P07205 417 aa17.62■□□□□ 0.41
SRRM4-202ENST00000537597 CDC27P30260 824 aa17.62■□□□□ 0.41
SRRM4-202ENST00000537597 GNAQP50148 359 aa17.62■□□□□ 0.41
SRRM4-202ENST00000537597 CACNB2Q08289 660 aaPredicted RBP17.62■□□□□ 0.41
SRRM4-202ENST00000537597 KCTD2Q14681 263 aa17.62■□□□□ 0.41
SRRM4-202ENST00000537597 CCAR1Q8IX12 1150 aaKnown RBP17.62■□□□□ 0.41
SRRM4-202ENST00000537597 MSL3Q8N5Y2 521 aaKnown RBP17.62■□□□□ 0.41
SRRM4-202ENST00000537597 TRPV1Q8NER1 839 aa17.62■□□□□ 0.41
SRRM4-202ENST00000537597 MORC4Q8TE76 937 aa17.62■□□□□ 0.41
SRRM4-202ENST00000537597 PNMA6FA0A0J9YX94 578 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 NFIBO00712 420 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 ALAS1P13196 640 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 RXRAP19793 462 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 KIF5BP33176 963 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
SRRM4-202ENST00000537597 APOBRQ0VD83 1088 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 PPP2R5BQ15173 497 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 NTRK3Q16288 839 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 WDR78Q5VTH9 848 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 TBC1D5Q92609 795 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 BRF1Q92994 677 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 PIGSQ96S52 555 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 KATNBL1Q9H079 304 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 CRISPLD2Q9H0B8 497 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 CYP46A1Q9Y6A2 500 aa17.61■□□□□ 0.41
SRRM4-202ENST00000537597 MKI67P46013 3256 aaKnown RBP17.61■□□□□ 0.41
SRRM4-202ENST00000537597 KLF18A0A0U1RQI7 1052 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 SNAI1O95863 264 aaPredicted RBP17.6■□□□□ 0.41
SRRM4-202ENST00000537597 CCL5P13501 91 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 PDIA3P30101 505 aaKnown RBP17.6■□□□□ 0.41
SRRM4-202ENST00000537597 CNTN2Q02246 1040 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 IFFO2Q5TF58 517 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 LHX8Q68G74 356 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 DPP9Q86TI2 863 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 FBXO11Q86XK2 927 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 CTCFLQ8NI51 663 aaPredicted RBP17.6■□□□□ 0.41
SRRM4-202ENST00000537597 ZNF274Q96GC6 653 aaPredicted RBP17.6■□□□□ 0.41
SRRM4-202ENST00000537597 UPF3BQ9BZI7 483 aaKnown RBP17.6■□□□□ 0.41
SRRM4-202ENST00000537597 UNC93B1Q9H1C4 597 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 VAT1LQ9HCJ6 419 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 RPTORQ8N122 1335 aa17.6■□□□□ 0.41
SRRM4-202ENST00000537597 PLXNA1Q9UIW2 1896 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 PFASO15067 1338 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 ABCB11O95342 1321 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 POTEFA5A3E0 1075 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 ZBTB43O43298 467 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 GJB1P08034 283 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 CYBAP13498 195 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 NFXL1Q6ZNB6 911 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 UBE2Q1Q7Z7E8 422 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 TINF2Q9BSI4 451 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 AMNQ9BXJ7 453 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 NRBP1Q9UHY1 535 aa17.59■□□□□ 0.41
SRRM4-202ENST00000537597 ISY1Q9ULR0 285 aaKnown RBP17.59■□□□□ 0.41
SRRM4-202ENST00000537597 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
SRRM4-202ENST00000537597 SYNGAP1Q96PV0 1343 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 LOC102724159A0A0B4J2E5 919 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 ZNF865P0CJ78 1059 aaPredicted RBP17.58■□□□□ 0.4
SRRM4-202ENST00000537597 CYP2C19P33261 490 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 ADD1P35611 737 aaKnown RBP17.58■□□□□ 0.4
SRRM4-202ENST00000537597 HSD17B4P51659 736 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 UBXN2AP68543 259 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 BAATQ14032 418 aaPredicted RBP17.58■□□□□ 0.4
SRRM4-202ENST00000537597 PWP2Q15269 919 aaKnown RBP17.58■□□□□ 0.4
SRRM4-202ENST00000537597 RAB11FIP4Q86YS3 637 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 CMTR1Q8N1G2 835 aaKnown RBP17.58■□□□□ 0.4
SRRM4-202ENST00000537597 ANKRD35Q8N283 1001 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 SAMD3Q8N6K7 520 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 HOMER2Q9NSB8 354 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.4
SRRM4-202ENST00000537597 SLC5A4Q9NY91 659 aa17.58■□□□□ 0.4
SRRM4-202ENST00000537597 CNTNAP5Q8WYK1 1306 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 CCDC85CA6NKD9 419 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 PRKAR2AP13861 404 aaKnown RBP17.57■□□□□ 0.4
SRRM4-202ENST00000537597 CAPN2P17655 700 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 EDNRBP24530 442 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 GJA8P48165 433 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 MNX1P50219 401 aaPredicted RBP17.57■□□□□ 0.4
SRRM4-202ENST00000537597 MICU3Q86XE3 530 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 CCDC144CPQ8IYA2 1237 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 SHISA4Q96DD7 197 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 DDX11Q96FC9 970 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 PURBQ96QR8 312 aaKnown RBP17.57■□□□□ 0.4
SRRM4-202ENST00000537597 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 MAP3K20Q9NYL2 800 aaKnown RBP17.57■□□□□ 0.4
SRRM4-202ENST00000537597 COL20A1Q9P218 1284 aa17.57■□□□□ 0.4
SRRM4-202ENST00000537597 MRPL11Q9Y3B7 192 aaKnown RBP17.57■□□□□ 0.4
SRRM4-202ENST00000537597 SGPL1O95470 568 aa17.56■□□□□ 0.4
SRRM4-202ENST00000537597 CCND3P30281 292 aaPredicted RBP17.56■□□□□ 0.4
SRRM4-202ENST00000537597 RPS6P62753 249 aaKnown RBP17.56■□□□□ 0.4
SRRM4-202ENST00000537597 RTN1Q16799 776 aa17.56■□□□□ 0.4
SRRM4-202ENST00000537597 MFSD14CQ5VZR4 134 aa17.56■□□□□ 0.4
SRRM4-202ENST00000537597 SYTL5Q8TDW5 730 aaPredicted RBP17.56■□□□□ 0.4
SRRM4-202ENST00000537597 BACH2Q9BYV9 841 aa17.56■□□□□ 0.4
SRRM4-202ENST00000537597 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.56■□□□□ 0.4
SRRM4-202ENST00000537597 PCDHA1Q9Y5I3 950 aa17.56■□□□□ 0.4
SRRM4-202ENST00000537597 POTEB2H3BUK9 544 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms