RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 BAATQ14032 418 aaPredicted RBP15.36■□□□□ 0.05
PRKDC-206ENST00000536429 SART3Q15020 963 aaKnown RBP15.36■□□□□ 0.05
PRKDC-206ENST00000536429 QRICH1Q2TAL8 776 aa15.36■□□□□ 0.05
PRKDC-206ENST00000536429 ADCK5Q3MIX3 580 aa15.36■□□□□ 0.05
PRKDC-206ENST00000536429 ARMCX2Q7L311 632 aa15.36■□□□□ 0.05
PRKDC-206ENST00000536429 NECAB2Q7Z6G3 386 aa15.36■□□□□ 0.05
PRKDC-206ENST00000536429 CCDC144CPQ8IYA2 1237 aa15.36■□□□□ 0.05
PRKDC-206ENST00000536429 KATNBL1Q9H079 304 aa15.36■□□□□ 0.05
PRKDC-206ENST00000536429 ZHX1Q9UKY1 873 aaPredicted RBP15.36■□□□□ 0.05
PRKDC-206ENST00000536429 ZNFX1Q9P2E3 1918 aaKnown RBP15.36■□□□□ 0.05
PRKDC-206ENST00000536429 SYNGAP1Q96PV0 1343 aa15.36■□□□□ 0.05
PRKDC-206ENST00000536429 CEP290O15078 2479 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 ADCY6O43306 1168 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 DHX16O60231 1041 aaKnown RBP15.35■□□□□ 0.05
PRKDC-206ENST00000536429 MSCO60682 206 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 PPP1R11O60927 126 aaPredicted RBP15.35■□□□□ 0.05
PRKDC-206ENST00000536429 COL6A1P12109 1028 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 CAPN2P17655 700 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 MCM5P33992 734 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 GJC2Q5T442 439 aaPredicted RBP15.35■□□□□ 0.05
PRKDC-206ENST00000536429 PRPF38BQ5VTL8 546 aaKnown RBP15.35■□□□□ 0.05
PRKDC-206ENST00000536429 RAB11FIP4Q86YS3 637 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 MSL3Q8N5Y2 521 aaKnown RBP15.35■□□□□ 0.05
PRKDC-206ENST00000536429 TBC1D5Q92609 795 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 DPF3Q92784 378 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 TCEANC2Q96MN5 208 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 C11orf49Q9H6J7 331 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 NRBP1Q9UHY1 535 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 CNPY2Q9Y2B0 182 aa15.35■□□□□ 0.05
PRKDC-206ENST00000536429 PTPDC1A2A3K4 754 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 CYTH3O43739 400 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 RXRAP19793 462 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 PTGS1P23219 599 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 ACVR2BQ13705 512 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 CATIPQ7Z7H3 387 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 ZNF654Q8IZM8 581 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 NUP133Q8WUM0 1156 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 MTMR8Q96EF0 704 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 HTATIP2Q9BUP3 242 aa15.34■□□□□ 0.05
PRKDC-206ENST00000536429 RANBP2P49792 3224 aaKnown RBP15.34■□□□□ 0.05
PRKDC-206ENST00000536429 H0YGN5 161 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 PGK1P00558 417 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 MYCNP04198 464 aaPredicted RBP15.33■□□□□ 0.04
PRKDC-206ENST00000536429 CALML3P27482 149 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 RPS6P62753 249 aaKnown RBP15.33■□□□□ 0.04
PRKDC-206ENST00000536429 IRX5P78411 483 aaPredicted RBP15.33■□□□□ 0.04
PRKDC-206ENST00000536429 EXOSC10Q01780 885 aaKnown RBP15.33■□□□□ 0.04
PRKDC-206ENST00000536429 TSGA10IPQ3SY00 556 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 RNF20Q5VTR2 975 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 RNF207Q6ZRF8 634 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 KCNB2Q92953 911 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 TMEM87BQ96K49 555 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 NEK1Q96PY6 1258 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 PIGSQ96S52 555 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 PLXNA1Q9UIW2 1896 aa15.33■□□□□ 0.04
PRKDC-206ENST00000536429 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.32■□□□□ 0.04
PRKDC-206ENST00000536429 DNM1LO00429 736 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 RARBP10826 455 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 AKR1A1P14550 325 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 CPA1P15085 419 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 LRRC41Q15345 812 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 TMEM63BQ5T3F8 832 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 NFXL1Q6ZNB6 911 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 FBXO11Q86XK2 927 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 HOMER1Q86YM7 354 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 PIBF1Q8WXW3 757 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 MTA3Q9BTC8 594 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 RIOX1Q9H6W3 641 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 XPNPEP3Q9NQH7 507 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 PDGFCQ9NRA1 345 aa15.32■□□□□ 0.04
PRKDC-206ENST00000536429 MYADML2A6NDP7 307 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 OPLAHO14841 1288 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 ZBTB5O15062 677 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 DDAH1O94760 285 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 PLEKHA8P1O95397 391 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 HSPA4P34932 840 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 LIFRP42702 1097 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 ALDH5A1P51649 535 aaPredicted RBP15.31■□□□□ 0.04
PRKDC-206ENST00000536429 LRRC26Q2I0M4 334 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 CCDC144BQ3MJ40 725 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 FBXO16Q8IX29 292 aaPredicted RBP15.31■□□□□ 0.04
PRKDC-206ENST00000536429 MORC4Q8TE76 937 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 SENP6Q9GZR1 1112 aaPredicted RBP15.31■□□□□ 0.04
PRKDC-206ENST00000536429 ABHD16BQ9H3Z7 469 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 COL20A1Q9P218 1284 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 PNMA2Q9UL42 364 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 FAM184BQ9ULE4 1060 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 SNX14Q9Y5W7 946 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 ABCB11O95342 1321 aa15.31■□□□□ 0.04
PRKDC-206ENST00000536429 CCDC69A6NI79 296 aa15.3■□□□□ 0.04
PRKDC-206ENST00000536429 ASB14A6NK59 587 aa15.3■□□□□ 0.04
PRKDC-206ENST00000536429 ADAMTS4O75173 837 aa15.3■□□□□ 0.04
PRKDC-206ENST00000536429 LCTP09848 1927 aa15.3■□□□□ 0.04
PRKDC-206ENST00000536429 ADCYAP1R1P41586 468 aa15.3■□□□□ 0.04
PRKDC-206ENST00000536429 ATN1P54259 1190 aaPredicted RBP15.3■□□□□ 0.04
PRKDC-206ENST00000536429 DHX32Q7L7V1 743 aaKnown RBP15.3■□□□□ 0.04
PRKDC-206ENST00000536429 CMTR1Q8N1G2 835 aaKnown RBP15.3■□□□□ 0.04
PRKDC-206ENST00000536429 SRBD1Q8N5C6 995 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms