RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 RPTORQ8N122 1335 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 MCM3APO60318 1980 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 FCER1AP12319 257 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 ZKSCAN1P17029 563 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 OAZ1P54368 228 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 SYDE2Q5VT97 1194 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 DPP9Q86TI2 863 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 FAM160B2Q86V87 743 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 IQCA1Q86XH1 822 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 MMP19Q99542 508 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 CWC22Q9HCG8 908 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 HMX1Q9NP08 348 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 HOMER2Q9NSB8 354 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 ISY1Q9ULR0 285 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 PDE4DIPQ5VU43 2346 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 CNTN2Q02246 1040 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 TROAPQ12815 778 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 IKQ13123 557 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 ADCK5Q3MIX3 580 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 OLFML2BQ68BL8 750 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 KIAA1211Q6ZU35 1233 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 EFCAB3Q8N7B9 438 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 NCOA7Q8NI08 942 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 DIS3LQ8TF46 1054 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 CLEC4DQ8WXI8 215 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 KAT14Q9H8E8 782 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 MAD2L2Q9UI95 211 aa10.39□□□□□ -0.75
CCDC90B-208ENST00000527025 BAZ2BQ9UIF8 2168 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 PALM3A6NDB9 673 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 SOWAHBA6NEL2 793 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 IFIT3O14879 490 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 PPP1R11O60927 126 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 SNAI1O95863 264 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 ICAM1P05362 532 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 ALAS1P13196 640 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 CYBAP13498 195 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 NT5C2P49902 561 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 KCTD2Q14681 263 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 IFIT1BQ5T764 474 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 ANO1Q5XXA6 986 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 TRMT44Q8IYL2 757 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 ADGRF4Q8IZF3 695 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 TBC1D5Q92609 795 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 KCNB2Q92953 911 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 TRERF1Q96PN7 1200 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 UBAC1Q9BSL1 405 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 LRRC2Q9BYS8 371 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 JMJD4Q9H9V9 463 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 LY9Q9HBG7 655 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 A1CFQ9NQ94 594 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 RNF146Q9NTX7 359 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 OGDHLQ9ULD0 1010 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 ALPK3Q96L96 1907 aa10.38□□□□□ -0.75
CCDC90B-208ENST00000527025 NFIBO00712 420 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 ADCY6O43306 1168 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 PRC1O43663 620 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 CYTH3O43739 400 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 TFRCP02786 760 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 ZNF865P0CJ78 1059 aaPredicted RBP10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 FDX1P10109 184 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 CPA1P15085 419 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 EXOSC10Q01780 885 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 TRDNQ13061 729 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 TSGA10IPQ3SY00 556 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 CCDC178Q5BJE1 867 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 MFSD14CQ5VZR4 134 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 FAM133AQ8N9E0 248 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 CHST13Q8NET6 341 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 TCEANC2Q96MN5 208 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 TINF2Q9BSI4 451 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 MYL10Q9BUA6 226 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 VAT1LQ9HCJ6 419 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 CCPG1Q9ULG6 757 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 DIS3Q9Y2L1 958 aaKnown RBP10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 MYH6P13533 1939 aa10.37□□□□□ -0.75
CCDC90B-208ENST00000527025 SH2B2O14492 632 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 PARP1P09874 1014 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 PTGS1P23219 599 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 COPB2P35606 906 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 GRM4Q14833 912 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 WTAPQ15007 396 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 TMEM67Q5HYA8 995 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 TMEM63BQ5T3F8 832 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 GPATCH4Q5T3I0 446 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 MAMDC4Q6UXC1 1216 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 RALYLQ86SE5 291 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 RAB11FIP4Q86YS3 637 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 ANKRD35Q8N283 1001 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 LENG1Q96BZ8 264 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 MTMR8Q96EF0 704 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 DDX11Q96FC9 970 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 PAWRQ96IZ0 340 aaKnown RBP10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 KATNBL1Q9H079 304 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 ACAD9Q9H845 621 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 CYP39A1Q9NYL5 469 aa10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 CTDP1Q9Y5B0 961 aaPredicted RBP10.36□□□□□ -0.75
CCDC90B-208ENST00000527025 KLRF2D3W0D1 207 aa10.35□□□□□ -0.75
CCDC90B-208ENST00000527025 OPLAHO14841 1288 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms