RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 PTPDC1A2A3K4 754 aa20.43■□□□□ 0.86
NR1H3-228ENST00000525441 SOWAHBA6NEL2 793 aa20.43■□□□□ 0.86
NR1H3-228ENST00000525441 MYCNP04198 464 aaPredicted RBP20.43■□□□□ 0.86
NR1H3-228ENST00000525441 GJC2Q5T442 439 aaPredicted RBP20.43■□□□□ 0.86
NR1H3-228ENST00000525441 CREB3L3Q68CJ9 461 aa20.43■□□□□ 0.86
NR1H3-228ENST00000525441 CCDC144CPQ8IYA2 1237 aa20.43■□□□□ 0.86
NR1H3-228ENST00000525441 MTA3Q9BTC8 594 aa20.43■□□□□ 0.86
NR1H3-228ENST00000525441 SENP6Q9GZR1 1112 aaPredicted RBP20.43■□□□□ 0.86
NR1H3-228ENST00000525441 ADD3Q9UEY8 706 aaKnown RBP20.43■□□□□ 0.86
NR1H3-228ENST00000525441 NFIBO00712 420 aa20.42■□□□□ 0.86
NR1H3-228ENST00000525441 MCM5P33992 734 aa20.42■□□□□ 0.86
NR1H3-228ENST00000525441 BAATQ14032 418 aaPredicted RBP20.42■□□□□ 0.86
NR1H3-228ENST00000525441 NECTIN1Q15223 517 aa20.42■□□□□ 0.86
NR1H3-228ENST00000525441 LRRC41Q15345 812 aa20.42■□□□□ 0.86
NR1H3-228ENST00000525441 CHST3Q7LGC8 479 aa20.42■□□□□ 0.86
NR1H3-228ENST00000525441 CATIPQ7Z7H3 387 aa20.42■□□□□ 0.86
NR1H3-228ENST00000525441 RNF180Q86T96 592 aa20.42■□□□□ 0.86
NR1H3-228ENST00000525441 CLEC4DQ8WXI8 215 aa20.42■□□□□ 0.86
NR1H3-228ENST00000525441 ABCB11O95342 1321 aa20.42■□□□□ 0.86
NR1H3-228ENST00000525441 LOC102724159A0A0B4J2E5 919 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 KLRF2D3W0D1 207 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 ANTXR2P58335 489 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 GRM4Q14833 912 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 PWP2Q15269 919 aaKnown RBP20.41■□□□□ 0.86
NR1H3-228ENST00000525441 USH1GQ495M9 461 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 RNF207Q6ZRF8 634 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 C7orf61Q8IZ16 206 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 IGDCC4Q8TDY8 1250 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 MAF1Q9H063 256 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 JMJD4Q9H9V9 463 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 VAT1LQ9HCJ6 419 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 PPP4R2Q9NY27 417 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 SMCHD1A6NHR9 2005 aa20.41■□□□□ 0.86
NR1H3-228ENST00000525441 PALM3A6NDB9 673 aaPredicted RBP20.4■□□□□ 0.86
NR1H3-228ENST00000525441 PRC1O43663 620 aa20.4■□□□□ 0.86
NR1H3-228ENST00000525441 DUSP11O75319 330 aaKnown RBP20.4■□□□□ 0.86
NR1H3-228ENST00000525441 QRICH1Q2TAL8 776 aa20.4■□□□□ 0.86
NR1H3-228ENST00000525441 CCDC144BQ3MJ40 725 aa20.4■□□□□ 0.86
NR1H3-228ENST00000525441 FBXO11Q86XK2 927 aa20.4■□□□□ 0.86
NR1H3-228ENST00000525441 TMTC2Q8N394 836 aa20.4■□□□□ 0.86
NR1H3-228ENST00000525441 STAG2Q8N3U4 1231 aa20.4■□□□□ 0.86
NR1H3-228ENST00000525441 RGS22Q8NE09 1264 aa20.4■□□□□ 0.86
NR1H3-228ENST00000525441 TMEM87BQ96K49 555 aa20.4■□□□□ 0.86
NR1H3-228ENST00000525441 MPHOSPH6Q99547 160 aaKnown RBP20.4■□□□□ 0.86
NR1H3-228ENST00000525441 MAD2L2Q9UI95 211 aa20.4■□□□□ 0.86
NR1H3-228ENST00000525441 PGK1P00558 417 aa20.39■□□□□ 0.85
NR1H3-228ENST00000525441 CALML3P27482 149 aa20.39■□□□□ 0.85
NR1H3-228ENST00000525441 LRRC26Q2I0M4 334 aa20.39■□□□□ 0.85
NR1H3-228ENST00000525441 MCF2L2Q86YR7 1114 aa20.39■□□□□ 0.85
NR1H3-228ENST00000525441 SPC25Q9HBM1 224 aa20.39■□□□□ 0.85
NR1H3-228ENST00000525441 SENP2Q9HC62 589 aa20.39■□□□□ 0.85
NR1H3-228ENST00000525441 MRPL11Q9Y3B7 192 aaKnown RBP20.39■□□□□ 0.85
NR1H3-228ENST00000525441 B4DLN1 442 aa20.38■□□□□ 0.85
NR1H3-228ENST00000525441 ALDH5A1P51649 535 aaPredicted RBP20.38■□□□□ 0.85
NR1H3-228ENST00000525441 MRPL12P52815 198 aaKnown RBP20.38■□□□□ 0.85
NR1H3-228ENST00000525441 RPS6P62753 249 aaKnown RBP20.38■□□□□ 0.85
NR1H3-228ENST00000525441 TROAPQ12815 778 aa20.38■□□□□ 0.85
NR1H3-228ENST00000525441 TRAF1Q13077 416 aa20.38■□□□□ 0.85
NR1H3-228ENST00000525441 SLC30A10Q6XR72 485 aa20.38■□□□□ 0.85
NR1H3-228ENST00000525441 NFXL1Q6ZNB6 911 aa20.38■□□□□ 0.85
NR1H3-228ENST00000525441 LENG1Q96BZ8 264 aaPredicted RBP20.38■□□□□ 0.85
NR1H3-228ENST00000525441 AMNQ9BXJ7 453 aa20.38■□□□□ 0.85
NR1H3-228ENST00000525441 KATNBL1Q9H079 304 aa20.38■□□□□ 0.85
NR1H3-228ENST00000525441 LY9Q9HBG7 655 aa20.38■□□□□ 0.85
NR1H3-228ENST00000525441 PHF24Q9UPV7 400 aa20.38■□□□□ 0.85
NR1H3-228ENST00000525441 MCM3APO60318 1980 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 ASTN1O14525 1302 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 SYNRGQ9UMZ2 1314 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 ADAMTS4O75173 837 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 DDAH1O94760 285 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 ADCYAP1R1P41586 468 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 ATN1P54259 1190 aaPredicted RBP20.37■□□□□ 0.85
NR1H3-228ENST00000525441 DNERQ8NFT8 737 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 CTCFLQ8NI51 663 aaPredicted RBP20.37■□□□□ 0.85
NR1H3-228ENST00000525441 MORC4Q8TE76 937 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 NUP133Q8WUM0 1156 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 PURBQ96QR8 312 aaKnown RBP20.37■□□□□ 0.85
NR1H3-228ENST00000525441 MAP3K14Q99558 947 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 TSEN34Q9BSV6 310 aaKnown RBP20.37■□□□□ 0.85
NR1H3-228ENST00000525441 VTA1Q9NP79 307 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 ALPK3Q96L96 1907 aa20.37■□□□□ 0.85
NR1H3-228ENST00000525441 CCDC69A6NI79 296 aa20.36■□□□□ 0.85
NR1H3-228ENST00000525441 SH2B2O14492 632 aaPredicted RBP20.36■□□□□ 0.85
NR1H3-228ENST00000525441 ZBTB5O15062 677 aa20.36■□□□□ 0.85
NR1H3-228ENST00000525441 KIF5BP33176 963 aa20.36■□□□□ 0.85
NR1H3-228ENST00000525441 TNFAIP2Q03169 654 aa20.36■□□□□ 0.85
NR1H3-228ENST00000525441 KRT32Q14532 448 aa20.36■□□□□ 0.85
NR1H3-228ENST00000525441 CHRDL2Q6WN34 429 aa20.36■□□□□ 0.85
NR1H3-228ENST00000525441 NOL8Q76FK4 1167 aaKnown RBP20.36■□□□□ 0.85
NR1H3-228ENST00000525441 ZNF654Q8IZM8 581 aa20.36■□□□□ 0.85
NR1H3-228ENST00000525441 MTMR8Q96EF0 704 aa20.36■□□□□ 0.85
NR1H3-228ENST00000525441 LIFRP42702 1097 aa20.35■□□□□ 0.85
NR1H3-228ENST00000525441 IQSEC1Q6DN90 963 aa20.35■□□□□ 0.85
NR1H3-228ENST00000525441 SLC39A5Q6ZMH5 540 aa20.35■□□□□ 0.85
NR1H3-228ENST00000525441 PCSK9Q8NBP7 692 aaKnown RBP20.35■□□□□ 0.85
NR1H3-228ENST00000525441 FERMT2Q96AC1 680 aa20.35■□□□□ 0.85
NR1H3-228ENST00000525441 NEK1Q96PY6 1258 aa20.35■□□□□ 0.85
NR1H3-228ENST00000525441 UPF3AQ9H1J1 476 aaKnown RBP20.35■□□□□ 0.85
NR1H3-228ENST00000525441 RIOX1Q9H6W3 641 aa20.35■□□□□ 0.85
NR1H3-228ENST00000525441 ZMYND8Q9ULU4 1186 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms