RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 MYADML2A6NDP7 307 aa21.92■■□□□ 1.1
SPIDR-220ENST00000522900 NFIBO00712 420 aa21.92■■□□□ 1.1
SPIDR-220ENST00000522900 SGSM2O43147 1006 aa21.92■■□□□ 1.1
SPIDR-220ENST00000522900 BAATQ14032 418 aaPredicted RBP21.92■■□□□ 1.1
SPIDR-220ENST00000522900 TRIM60Q495X7 471 aa21.92■■□□□ 1.1
SPIDR-220ENST00000522900 CLEC4DQ8WXI8 215 aa21.92■■□□□ 1.1
SPIDR-220ENST00000522900 CNNM2Q9H8M5 875 aa21.92■■□□□ 1.1
SPIDR-220ENST00000522900 DUSP11O75319 330 aaKnown RBP21.91■■□□□ 1.1
SPIDR-220ENST00000522900 CYP21A2P08686 494 aa21.91■■□□□ 1.1
SPIDR-220ENST00000522900 MDM2Q00987 491 aaPredicted RBP21.91■■□□□ 1.1
SPIDR-220ENST00000522900 SNX17Q15036 470 aa21.91■■□□□ 1.1
SPIDR-220ENST00000522900 GPATCH4Q5T3I0 446 aaKnown RBP21.91■■□□□ 1.1
SPIDR-220ENST00000522900 KLHDC9Q8NEP7 349 aa21.91■■□□□ 1.1
SPIDR-220ENST00000522900 TRIOBPQ9H2D6 2365 aa21.91■■□□□ 1.1
SPIDR-220ENST00000522900 LAMA4Q16363 1823 aa21.9■■□□□ 1.1
SPIDR-220ENST00000522900 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.9■■□□□ 1.1
SPIDR-220ENST00000522900 A0A1W2PQ45 241 aaPredicted RBP21.9■■□□□ 1.1
SPIDR-220ENST00000522900 A0A1W2PQY0 241 aa21.9■■□□□ 1.1
SPIDR-220ENST00000522900 ASB14A6NK59 587 aa21.9■■□□□ 1.1
SPIDR-220ENST00000522900 SOX1O00570 391 aaPredicted RBP21.9■■□□□ 1.1
SPIDR-220ENST00000522900 KCNA10Q16322 511 aa21.9■■□□□ 1.1
SPIDR-220ENST00000522900 CCSAPQ6IQ19 270 aaPredicted RBP21.9■■□□□ 1.1
SPIDR-220ENST00000522900 A0A1W2PPC1 479 aa21.89■■□□□ 1.09
SPIDR-220ENST00000522900 PTGS1P23219 599 aa21.89■■□□□ 1.09
SPIDR-220ENST00000522900 ACLYP53396 1101 aa21.89■■□□□ 1.09
SPIDR-220ENST00000522900 SEC23AQ15436 765 aa21.89■■□□□ 1.09
SPIDR-220ENST00000522900 EEPD1Q7L9B9 569 aa21.89■■□□□ 1.09
SPIDR-220ENST00000522900 UBAC1Q9BSL1 405 aa21.89■■□□□ 1.09
SPIDR-220ENST00000522900 UBE2OQ9C0C9 1292 aaKnown RBP21.89■■□□□ 1.09
SPIDR-220ENST00000522900 PDGFCQ9NRA1 345 aa21.89■■□□□ 1.09
SPIDR-220ENST00000522900 U3KPZ7 1027 aaPredicted RBP21.89■■□□□ 1.09
SPIDR-220ENST00000522900 PTPDC1A2A3K4 754 aa21.88■■□□□ 1.09
SPIDR-220ENST00000522900 TMEM63BQ5T3F8 832 aa21.88■■□□□ 1.09
SPIDR-220ENST00000522900 C1orf53Q5VUE5 145 aa21.88■■□□□ 1.09
SPIDR-220ENST00000522900 SLC30A10Q6XR72 485 aa21.88■■□□□ 1.09
SPIDR-220ENST00000522900 SH3RF1Q7Z6J0 888 aa21.88■■□□□ 1.09
SPIDR-220ENST00000522900 ADGRF4Q8IZF3 695 aa21.88■■□□□ 1.09
SPIDR-220ENST00000522900 TSEN34Q9BSV6 310 aaKnown RBP21.88■■□□□ 1.09
SPIDR-220ENST00000522900 CTAGE5O15320 804 aa21.87■■□□□ 1.09
SPIDR-220ENST00000522900 C6orf222P0C671 652 aaPredicted RBP21.87■■□□□ 1.09
SPIDR-220ENST00000522900 GJA9P57773 515 aa21.87■■□□□ 1.09
SPIDR-220ENST00000522900 TNFAIP2Q03169 654 aa21.87■■□□□ 1.09
SPIDR-220ENST00000522900 TLE2Q04725 743 aa21.87■■□□□ 1.09
SPIDR-220ENST00000522900 USH1GQ495M9 461 aa21.87■■□□□ 1.09
SPIDR-220ENST00000522900 IFIT1BQ5T764 474 aaKnown RBP21.87■■□□□ 1.09
SPIDR-220ENST00000522900 TAPT1Q6NXT6 567 aa21.87■■□□□ 1.09
SPIDR-220ENST00000522900 MAP4K1Q92918 833 aa21.87■■□□□ 1.09
SPIDR-220ENST00000522900 UPF3AQ9H1J1 476 aaKnown RBP21.87■■□□□ 1.09
SPIDR-220ENST00000522900 WDR19Q8NEZ3 1342 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 TRIM43BA6NCK2 446 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 E7EWF7 191 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 CALML3P27482 149 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 CDC37Q16543 378 aaPredicted RBP21.86■■□□□ 1.09
SPIDR-220ENST00000522900 ASPRV1Q53RT3 343 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 STOX1Q6ZVD7 989 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 FBXO16Q8IX29 292 aaPredicted RBP21.86■■□□□ 1.09
SPIDR-220ENST00000522900 STAG2Q8N3U4 1231 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 MORC4Q8TE76 937 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 TRIM43Q96BQ3 446 aaPredicted RBP21.86■■□□□ 1.09
SPIDR-220ENST00000522900 LRCH3Q96II8 777 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 SENP2Q9HC62 589 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 VAT1LQ9HCJ6 419 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 PRDM5Q9NQX1 630 aaPredicted RBP21.86■■□□□ 1.09
SPIDR-220ENST00000522900 PDLIM7Q9NR12 457 aa21.86■■□□□ 1.09
SPIDR-220ENST00000522900 PARP1P09874 1014 aaKnown RBP21.85■■□□□ 1.09
SPIDR-220ENST00000522900 SMPD1P17405 629 aa21.85■■□□□ 1.09
SPIDR-220ENST00000522900 CST5P28325 142 aaPredicted RBP21.85■■□□□ 1.09
SPIDR-220ENST00000522900 ALDH5A1P51649 535 aaPredicted RBP21.85■■□□□ 1.09
SPIDR-220ENST00000522900 RPS6P62753 249 aaKnown RBP21.85■■□□□ 1.09
SPIDR-220ENST00000522900 TRDNQ13061 729 aa21.85■■□□□ 1.09
SPIDR-220ENST00000522900 GNASQ5JWF2 1037 aa21.85■■□□□ 1.09
SPIDR-220ENST00000522900 RNF207Q6ZRF8 634 aa21.85■■□□□ 1.09
SPIDR-220ENST00000522900 NOL8Q76FK4 1167 aaKnown RBP21.85■■□□□ 1.09
SPIDR-220ENST00000522900 CHST3Q7LGC8 479 aa21.85■■□□□ 1.09
SPIDR-220ENST00000522900 TBC1D5Q92609 795 aa21.85■■□□□ 1.09
SPIDR-220ENST00000522900 PRKAG2Q9UGJ0 569 aa21.85■■□□□ 1.09
SPIDR-220ENST00000522900 PNMA2Q9UL42 364 aa21.85■■□□□ 1.09
SPIDR-220ENST00000522900 GNEQ9Y223 722 aaKnown RBP21.85■■□□□ 1.09
SPIDR-220ENST00000522900 MOXD2PA6NHM9 499 aa21.84■■□□□ 1.09
SPIDR-220ENST00000522900 ASGR1P07306 291 aa21.84■■□□□ 1.09
SPIDR-220ENST00000522900 BEX3Q00994 111 aa21.84■■□□□ 1.09
SPIDR-220ENST00000522900 TDHQ8IZJ6 230 aa21.84■■□□□ 1.09
SPIDR-220ENST00000522900 LBHD1Q9BQE6 289 aaPredicted RBP21.84■■□□□ 1.09
SPIDR-220ENST00000522900 JMJD4Q9H9V9 463 aa21.84■■□□□ 1.09
SPIDR-220ENST00000522900 STARD7Q9NQZ5 370 aa21.84■■□□□ 1.09
SPIDR-220ENST00000522900 RBM8AQ9Y5S9 174 aaKnown RBP21.84■■□□□ 1.09
SPIDR-220ENST00000522900 MCM3APO60318 1980 aa21.84■■□□□ 1.09
SPIDR-220ENST00000522900 PQBP1O60828 265 aaKnown RBP21.83■■□□□ 1.09
SPIDR-220ENST00000522900 NKX3-2P78367 333 aa21.83■■□□□ 1.09
SPIDR-220ENST00000522900 QRICH1Q2TAL8 776 aa21.83■■□□□ 1.09
SPIDR-220ENST00000522900 IQSEC1Q6DN90 963 aa21.83■■□□□ 1.09
SPIDR-220ENST00000522900 CENPQQ7L2Z9 268 aaPredicted RBP21.83■■□□□ 1.09
SPIDR-220ENST00000522900 NUP133Q8WUM0 1156 aa21.83■■□□□ 1.09
SPIDR-220ENST00000522900 SPC25Q9HBM1 224 aa21.83■■□□□ 1.09
SPIDR-220ENST00000522900 ADD3Q9UEY8 706 aaKnown RBP21.83■■□□□ 1.09
SPIDR-220ENST00000522900 IFIT3O14879 490 aaKnown RBP21.82■■□□□ 1.08
SPIDR-220ENST00000522900 DYNC1LI2O43237 492 aaPredicted RBP21.82■■□□□ 1.08
SPIDR-220ENST00000522900 ITGB8P26012 769 aa21.82■■□□□ 1.08
SPIDR-220ENST00000522900 KIAA1211Q6ZU35 1233 aa21.82■■□□□ 1.08
SPIDR-220ENST00000522900 PCSK9Q8NBP7 692 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms