RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 BAATQ14032 418 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 NECTIN1Q15223 517 aa20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 LRRC26Q2I0M4 334 aa20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 MB21D2Q8IYB1 491 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 C7orf61Q8IZ16 206 aa20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 STAG2Q8N3U4 1231 aa20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 LENG1Q96BZ8 264 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 PURBQ96QR8 312 aaKnown RBP20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 KATNBL1Q9H079 304 aa20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 ANO2Q9NQ90 1003 aa20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 COLQQ9Y215 455 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC9-211ENST00000521700 ERICH2A1L162 156 aa20.88■□□□□ 0.93
TRAPPC9-211ENST00000521700 SLC27A2O14975 620 aa20.88■□□□□ 0.93
TRAPPC9-211ENST00000521700 PGK1P00558 417 aa20.88■□□□□ 0.93
TRAPPC9-211ENST00000521700 CDC37Q16543 378 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC9-211ENST00000521700 JMJD4Q9H9V9 463 aa20.88■□□□□ 0.93
TRAPPC9-211ENST00000521700 VAT1LQ9HCJ6 419 aa20.88■□□□□ 0.93
TRAPPC9-211ENST00000521700 PCDH10Q9P2E7 1040 aa20.88■□□□□ 0.93
TRAPPC9-211ENST00000521700 LCTP09848 1927 aa20.88■□□□□ 0.93
TRAPPC9-211ENST00000521700 PALM3A6NDB9 673 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC9-211ENST00000521700 ASB14A6NK59 587 aa20.87■□□□□ 0.93
TRAPPC9-211ENST00000521700 KBTBD13C9JR72 458 aa20.87■□□□□ 0.93
TRAPPC9-211ENST00000521700 WTAPQ15007 396 aa20.87■□□□□ 0.93
TRAPPC9-211ENST00000521700 CREB3L3Q68CJ9 461 aa20.87■□□□□ 0.93
TRAPPC9-211ENST00000521700 IGDCC4Q8TDY8 1250 aa20.87■□□□□ 0.93
TRAPPC9-211ENST00000521700 MAD2L2Q9UI95 211 aa20.87■□□□□ 0.93
TRAPPC9-211ENST00000521700 DDX49Q9Y6V7 483 aaKnown RBP20.87■□□□□ 0.93
TRAPPC9-211ENST00000521700 PTPDC1A2A3K4 754 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 KLRF2D3W0D1 207 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 CDC45O75419 566 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 ADCYAP1R1P41586 468 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 ATN1P54259 1190 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 SART3Q15020 963 aaKnown RBP20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 CCDC144BQ3MJ40 725 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 USH1GQ495M9 461 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 TMEM67Q5HYA8 995 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 CHRDL2Q6WN34 429 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 RNF207Q6ZRF8 634 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 RNF180Q86T96 592 aa20.86■□□□□ 0.93
TRAPPC9-211ENST00000521700 ADCY6O43306 1168 aa20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 DHX16O60231 1041 aaKnown RBP20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 ADAMTS4O75173 837 aa20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 DUSP11O75319 330 aaKnown RBP20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 TROAPQ12815 778 aa20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 COL9A3Q14050 684 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 QRICH1Q2TAL8 776 aa20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 HABP4Q5JVS0 413 aaKnown RBP20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 SLC30A10Q6XR72 485 aa20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 MORC4Q8TE76 937 aa20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 GPHNQ9NQX3 736 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 ZMYND8Q9ULU4 1186 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC9-211ENST00000521700 CALML3P27482 149 aa20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 RPS6P62753 249 aaKnown RBP20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 GRM4Q14833 912 aa20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 CASC1Q6TDU7 716 aa20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 SLC39A5Q6ZMH5 540 aa20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 RGS22Q8NE09 1264 aa20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 KLHDC9Q8NEP7 349 aa20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 FERMT2Q96AC1 680 aa20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 ADD3Q9UEY8 706 aaKnown RBP20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 PHF24Q9UPV7 400 aa20.84■□□□□ 0.93
TRAPPC9-211ENST00000521700 ABCB11O95342 1321 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 SYNRGQ9UMZ2 1314 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 PRC1O43663 620 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 SYN1P17600 705 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 ALDH5A1P51649 535 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 IRX5P78411 483 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 SLC35G1Q2M3R5 365 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 FBXO11Q86XK2 927 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 TBC1D5Q92609 795 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 MTMR8Q96EF0 704 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 MTA3Q9BTC8 594 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 LY9Q9HBG7 655 aa20.83■□□□□ 0.93
TRAPPC9-211ENST00000521700 MYH6P13533 1939 aa20.82■□□□□ 0.92
TRAPPC9-211ENST00000521700 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC9-211ENST00000521700 MCM5P33992 734 aa20.82■□□□□ 0.92
TRAPPC9-211ENST00000521700 TAPT1Q6NXT6 567 aa20.82■□□□□ 0.92
TRAPPC9-211ENST00000521700 EEPD1Q7L9B9 569 aa20.82■□□□□ 0.92
TRAPPC9-211ENST00000521700 CATIPQ7Z7H3 387 aa20.82■□□□□ 0.92
TRAPPC9-211ENST00000521700 PRO3102Q9H379 93 aa20.82■□□□□ 0.92
TRAPPC9-211ENST00000521700 PDGFCQ9NRA1 345 aa20.82■□□□□ 0.92
TRAPPC9-211ENST00000521700 RBM27Q9P2N5 1060 aaKnown RBP20.82■□□□□ 0.92
TRAPPC9-211ENST00000521700 LOC102724159A0A0B4J2E5 919 aa20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 MYADML2A6NDP7 307 aa20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 GJA9P57773 515 aa20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 RTP1P59025 263 aa20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 TNFAIP2Q03169 654 aa20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 PWP2Q15269 919 aaKnown RBP20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 CCSAPQ6IQ19 270 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 FBXO16Q8IX29 292 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 TMEM87BQ96K49 555 aa20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 TSEN34Q9BSV6 310 aaKnown RBP20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 UPF3AQ9H1J1 476 aaKnown RBP20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 RIOX1Q9H6W3 641 aa20.81■□□□□ 0.92
TRAPPC9-211ENST00000521700 SH2B2O14492 632 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 CYTH3O43739 400 aa20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 PPP1R11O60927 126 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 SNX17Q15036 470 aa20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 KCNA10Q16322 511 aa20.8■□□□□ 0.92
TRAPPC9-211ENST00000521700 RNF20Q5VTR2 975 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms