RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 DGKHQ86XP1 1220 aa12.01□□□□□ -0.49
TRIM35-204ENST00000521283 MSL3Q8N5Y2 521 aaKnown RBP12.01□□□□□ -0.49
TRIM35-204ENST00000521283 DCAF4Q8WV16 495 aa12.01□□□□□ -0.49
TRIM35-204ENST00000521283 TRIB2Q92519 343 aa12.01□□□□□ -0.49
TRIM35-204ENST00000521283 KRT23Q9C075 422 aa12.01□□□□□ -0.49
TRIM35-204ENST00000521283 UNC93B1Q9H1C4 597 aa12.01□□□□□ -0.49
TRIM35-204ENST00000521283 NRBP1Q9UHY1 535 aa12.01□□□□□ -0.49
TRIM35-204ENST00000521283 SMAPO00193 183 aa12□□□□□ -0.49
TRIM35-204ENST00000521283 TNRC18O15417 2968 aaPredicted RBP12□□□□□ -0.49
TRIM35-204ENST00000521283 ADORA2AP29274 412 aa12□□□□□ -0.49
TRIM35-204ENST00000521283 TKFCQ3LXA3 575 aa12□□□□□ -0.49
TRIM35-204ENST00000521283 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12□□□□□ -0.49
TRIM35-204ENST00000521283 CHST13Q8NET6 341 aa12□□□□□ -0.49
TRIM35-204ENST00000521283 DEFB118Q96PH6 123 aa12□□□□□ -0.49
TRIM35-204ENST00000521283 SLC38A10Q9HBR0 1119 aa12□□□□□ -0.49
TRIM35-204ENST00000521283 IL17RBQ9NRM6 502 aa12□□□□□ -0.49
TRIM35-204ENST00000521283 ZNF214Q9UL59 606 aaPredicted RBP12□□□□□ -0.49
TRIM35-204ENST00000521283 BRCA2P51587 3418 aa12□□□□□ -0.49
TRIM35-204ENST00000521283 TMEM232C9JQI7 657 aa11.99□□□□□ -0.49
TRIM35-204ENST00000521283 MYCP01106 439 aaPredicted RBP11.99□□□□□ -0.49
TRIM35-204ENST00000521283 GSPT1P15170 499 aaKnown RBP11.99□□□□□ -0.49
TRIM35-204ENST00000521283 TRDNQ13061 729 aa11.99□□□□□ -0.49
TRIM35-204ENST00000521283 RRP12Q5JTH9 1297 aaKnown RBP11.99□□□□□ -0.49
TRIM35-204ENST00000521283 LRRC47Q8N1G4 583 aaKnown RBP11.99□□□□□ -0.49
TRIM35-204ENST00000521283 REPS2Q8NFH8 660 aa11.99□□□□□ -0.49
TRIM35-204ENST00000521283 KIFC2Q96AC6 838 aa11.99□□□□□ -0.49
TRIM35-204ENST00000521283 MMP19Q99542 508 aa11.99□□□□□ -0.49
TRIM35-204ENST00000521283 MAF1Q9H063 256 aa11.99□□□□□ -0.49
TRIM35-204ENST00000521283 NPDC1Q9NQX5 325 aaPredicted RBP11.99□□□□□ -0.49
TRIM35-204ENST00000521283 FARP2O94887 1054 aaPredicted RBP11.98□□□□□ -0.49
TRIM35-204ENST00000521283 CHMLP26374 656 aa11.98□□□□□ -0.49
TRIM35-204ENST00000521283 MLLT3P42568 568 aaPredicted RBP11.98□□□□□ -0.49
TRIM35-204ENST00000521283 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
TRIM35-204ENST00000521283 IKQ13123 557 aaPredicted RBP11.98□□□□□ -0.49
TRIM35-204ENST00000521283 GPATCH4Q5T3I0 446 aaKnown RBP11.98□□□□□ -0.49
TRIM35-204ENST00000521283 SNRNP48Q6IEG0 339 aaKnown RBP11.98□□□□□ -0.49
TRIM35-204ENST00000521283 NECAB2Q7Z6G3 386 aa11.98□□□□□ -0.49
TRIM35-204ENST00000521283 ANKS1AQ92625 1134 aa11.98□□□□□ -0.49
TRIM35-204ENST00000521283 DDX11Q96FC9 970 aa11.98□□□□□ -0.49
TRIM35-204ENST00000521283 FBXO28Q9NVF7 368 aa11.98□□□□□ -0.49
TRIM35-204ENST00000521283 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
TRIM35-204ENST00000521283 PEX10O60683 326 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 IGHA2P01877 340 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 MCCP23508 829 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 HAND2P61296 217 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 BMP2KLQ5H9B9 411 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 CASC1Q6TDU7 716 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 BTNL9Q6UXG8 535 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 KIAA1211Q6ZU35 1233 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 UBE2Q1Q7Z7E8 422 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 SHISA4Q96DD7 197 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 NUP88Q99567 741 aaPredicted RBP11.97□□□□□ -0.49
TRIM35-204ENST00000521283 TMEM47Q9BQJ4 181 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 ISY1Q9ULR0 285 aaKnown RBP11.97□□□□□ -0.49
TRIM35-204ENST00000521283 NR2E3Q9Y5X4 410 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 PLXNA1Q9UIW2 1896 aa11.97□□□□□ -0.49
TRIM35-204ENST00000521283 SGSM2O43147 1006 aa11.96□□□□□ -0.49
TRIM35-204ENST00000521283 MAML3Q96JK9 1138 aa11.96□□□□□ -0.49
TRIM35-204ENST00000521283 UBAC1Q9BSL1 405 aa11.96□□□□□ -0.49
TRIM35-204ENST00000521283 MTA3Q9BTC8 594 aa11.96□□□□□ -0.49
TRIM35-204ENST00000521283 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.96□□□□□ -0.49
TRIM35-204ENST00000521283 PFASO15067 1338 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 SYNGAP1Q96PV0 1343 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 LOC102724159A0A0B4J2E5 919 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 ERICH2A1L162 156 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 SEPT4O43236 478 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 KDM4AO75164 1064 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 SNHG28P0DPA3 235 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 SART3Q15020 963 aaKnown RBP11.95□□□□□ -0.5
TRIM35-204ENST00000521283 PWP2Q15269 919 aaKnown RBP11.95□□□□□ -0.5
TRIM35-204ENST00000521283 CCL14Q16627 93 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 ZNF792Q3KQV3 632 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 TBC1D10CQ8IV04 446 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 CPXCR1Q8N123 301 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 ANKRD35Q8N283 1001 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 ARRDC4Q8NCT1 418 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 NPLOC4Q8TAT6 608 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 TATDN2Q93075 761 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 LRCH3Q96II8 777 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 ZSCAN10Q96SZ4 725 aaPredicted RBP11.95□□□□□ -0.5
TRIM35-204ENST00000521283 TINF2Q9BSI4 451 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 ACAD9Q9H845 621 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 KAT14Q9H8E8 782 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 INCENPQ9NQS7 918 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 ZSWIM5Q9P217 1185 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 DDX20Q9UHI6 824 aaKnown RBP11.95□□□□□ -0.5
TRIM35-204ENST00000521283 CNPY2Q9Y2B0 182 aa11.95□□□□□ -0.5
TRIM35-204ENST00000521283 NMT2O60551 498 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 COBLO75128 1261 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 ICAM1P05362 532 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 PDHBP11177 359 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 CYBAP13498 195 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 CNGA1P29973 690 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 TRAF1Q13077 416 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 CCDC96Q2M329 555 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 MAMDC4Q6UXC1 1216 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 KCTD1Q719H9 257 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 RALYLQ86SE5 291 aaKnown RBP11.94□□□□□ -0.5
TRIM35-204ENST00000521283 TTC13Q8NBP0 860 aa11.94□□□□□ -0.5
TRIM35-204ENST00000521283 DPF3Q92784 378 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms