RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 CST5P28325 142 aaPredicted RBP12.61□□□□□ -0.39
PVT1-209ENST00000520913 CCDC144BQ3MJ40 725 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 LRIT3Q3SXY7 679 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 TTBK2Q6IQ55 1244 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 NSMFQ6X4W1 530 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 DGKHQ86XP1 1220 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 ZKSCAN3Q9BRR0 538 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 KATNBL1Q9H079 304 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 SPC25Q9HBM1 224 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 PRDM5Q9NQX1 630 aaPredicted RBP12.61□□□□□ -0.39
PVT1-209ENST00000520913 PDLIM7Q9NR12 457 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 WDR19Q8NEZ3 1342 aa12.61□□□□□ -0.39
PVT1-209ENST00000520913 TANC1Q9C0D5 1861 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 SOWAHBA6NEL2 793 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 B4E1Z4 1266 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 ADCY6O43306 1168 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 C6orf222P0C671 652 aaPredicted RBP12.6□□□□□ -0.39
PVT1-209ENST00000520913 ACLYP53396 1101 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 KLHDC9Q8NEP7 349 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 NUP133Q8WUM0 1156 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 RUFY2Q8WXA3 655 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 LRCH3Q96II8 777 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 KRT23Q9C075 422 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 UPF3AQ9H1J1 476 aaKnown RBP12.6□□□□□ -0.39
PVT1-209ENST00000520913 KAT14Q9H8E8 782 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 STARD7Q9NQZ5 370 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 ASTN1O14525 1302 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 TNKSO95271 1327 aa12.6□□□□□ -0.39
PVT1-209ENST00000520913 LOC102724159A0A0B4J2E5 919 aa12.59□□□□□ -0.39
PVT1-209ENST00000520913 GJA9P57773 515 aa12.59□□□□□ -0.39
PVT1-209ENST00000520913 PWP2Q15269 919 aaKnown RBP12.59□□□□□ -0.39
PVT1-209ENST00000520913 GPR153Q6NV75 609 aa12.59□□□□□ -0.39
PVT1-209ENST00000520913 PCSK9Q8NBP7 692 aaKnown RBP12.59□□□□□ -0.39
PVT1-209ENST00000520913 GLT1D1Q96MS3 346 aa12.59□□□□□ -0.39
PVT1-209ENST00000520913 ZSCAN10Q96SZ4 725 aaPredicted RBP12.59□□□□□ -0.39
PVT1-209ENST00000520913 IL25Q9H293 177 aa12.59□□□□□ -0.39
PVT1-209ENST00000520913 ADD3Q9UEY8 706 aaKnown RBP12.59□□□□□ -0.39
PVT1-209ENST00000520913 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
PVT1-209ENST00000520913 PTPDC1A2A3K4 754 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 MYADML2A6NDP7 307 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 NFIBO00712 420 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 CLTBP09497 229 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.4
PVT1-209ENST00000520913 TNFAIP2Q03169 654 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 TLE2Q04725 743 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 KCNA10Q16322 511 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 ASPRV1Q53RT3 343 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 CCSAPQ6IQ19 270 aaPredicted RBP12.58□□□□□ -0.4
PVT1-209ENST00000520913 TLK2Q86UE8 772 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 FBXO16Q8IX29 292 aaPredicted RBP12.58□□□□□ -0.4
PVT1-209ENST00000520913 ENAHQ8N8S7 591 aaPredicted RBP12.58□□□□□ -0.4
PVT1-209ENST00000520913 GBF1Q92538 1859 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 UBAC1Q9BSL1 405 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 VTA1Q9NP79 307 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 MYH7BA7E2Y1 1941 aa12.58□□□□□ -0.4
PVT1-209ENST00000520913 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.57□□□□□ -0.4
PVT1-209ENST00000520913 PQBP1O60828 265 aaKnown RBP12.57□□□□□ -0.4
PVT1-209ENST00000520913 ASGR1P07306 291 aa12.57□□□□□ -0.4
PVT1-209ENST00000520913 GOLGA8HP0CJ92 632 aa12.57□□□□□ -0.4
PVT1-209ENST00000520913 BAATQ14032 418 aaPredicted RBP12.57□□□□□ -0.4
PVT1-209ENST00000520913 SLC30A10Q6XR72 485 aa12.57□□□□□ -0.4
PVT1-209ENST00000520913 ANKRD33Q7Z3H0 272 aa12.57□□□□□ -0.4
PVT1-209ENST00000520913 MORC4Q8TE76 937 aa12.57□□□□□ -0.4
PVT1-209ENST00000520913 ANKS1AQ92625 1134 aa12.57□□□□□ -0.4
PVT1-209ENST00000520913 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
PVT1-209ENST00000520913 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
PVT1-209ENST00000520913 ELP1O95163 1332 aa12.57□□□□□ -0.4
PVT1-209ENST00000520913 SCN10AQ9Y5Y9 1956 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
PVT1-209ENST00000520913 TRIM43BA6NCK2 446 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 DCDC2CA8MYV0 355 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 CHMLP26374 656 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 NKX3-2P78367 333 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 TRDNQ13061 729 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 CDC37Q16543 378 aaPredicted RBP12.56□□□□□ -0.4
PVT1-209ENST00000520913 USH1GQ495M9 461 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 GNASQ5JWF2 1037 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 IFIT1BQ5T764 474 aaKnown RBP12.56□□□□□ -0.4
PVT1-209ENST00000520913 RNF207Q6ZRF8 634 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 NOL8Q76FK4 1167 aaKnown RBP12.56□□□□□ -0.4
PVT1-209ENST00000520913 SH3RF1Q7Z6J0 888 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 CLEC4DQ8WXI8 215 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 BADQ92934 168 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 TRIM43Q96BQ3 446 aaPredicted RBP12.56□□□□□ -0.4
PVT1-209ENST00000520913 TOX2Q96NM4 488 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 GNEQ9Y223 722 aaKnown RBP12.56□□□□□ -0.4
PVT1-209ENST00000520913 ABCB11O95342 1321 aa12.56□□□□□ -0.4
PVT1-209ENST00000520913 KIAA0355O15063 1070 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 PARP1P09874 1014 aaKnown RBP12.55□□□□□ -0.4
PVT1-209ENST00000520913 RAG1P15918 1043 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 CALML3P27482 149 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 RPS6P62753 249 aaKnown RBP12.55□□□□□ -0.4
PVT1-209ENST00000520913 IRX5P78411 483 aaPredicted RBP12.55□□□□□ -0.4
PVT1-209ENST00000520913 IQSEC1Q6DN90 963 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 TAPT1Q6NXT6 567 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 EEPD1Q7L9B9 569 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 DNERQ8NFT8 737 aa12.55□□□□□ -0.4
PVT1-209ENST00000520913 PURBQ96QR8 312 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms