RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 CCPG1Q9ULG6 757 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 MTMR7Q9Y216 660 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 MRPL11Q9Y3B7 192 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 ABCB11O95342 1321 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 SPDYE16A6NNV3 312 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 KLRF2D3W0D1 207 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 CHGBP05060 677 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 ICAM1P05362 532 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 PDHBP11177 359 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 BCRP11274 1271 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 GUCY1A2P33402 732 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 NOVP48745 357 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 METAP2P50579 478 aaKnown RBP eCLIP6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 PTH1RQ03431 593 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 BRDTQ58F21 947 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 SNRNP48Q6IEG0 339 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 POTEEQ6S8J3 1075 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 RUFY3Q7L099 469 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 SGMS1Q86VZ5 419 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 RIOX2Q8IUF8 465 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 ZNF654Q8IZM8 581 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 CCDC148Q8NFR7 591 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 BICD2Q8TD16 824 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 PXYLP1Q8TE99 480 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 MMP19Q99542 508 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 P2RX7Q99572 595 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 AMNQ9BXJ7 453 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 SPC25Q9HBM1 224 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 SLC38A10Q9HBR0 1119 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 BRMS1Q9HCU9 246 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 SRRDQ9UH36 339 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 TCEAL9Q9UHQ7 104 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 CNPY2Q9Y2B0 182 aa6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 DIS3Q9Y2L1 958 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-220ENST00000520260 SIPA1L1O43166 1804 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 A0A1W2PRG0 241 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 ASB14A6NK59 587 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 GOLGA8AA7E2F4 631 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 GOLGA8BA8MQT2 603 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 SH2B2O14492 632 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 ZBTB5O15062 677 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 FOXP2O15409 715 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 HMGCRP04035 888 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 HOXC6P09630 235 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 SNHG28P0DPA3 235 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 RPS6KB1P23443 525 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 GRK4P32298 578 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 MAP2K5Q13163 448 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 MOGSQ13724 837 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 TRIM29Q14134 588 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 RABEP1Q15276 862 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 RTN1Q16799 776 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 PPP1R18Q6NYC8 613 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 BTNL9Q6UXG8 535 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 CCDC84Q86UT8 332 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 ZSCAN30Q86W11 494 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 MICU3Q86XE3 530 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 FBXO11Q86XK2 927 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 MB21D2Q8IYB1 491 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 FBXL16Q8N461 479 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 CD99L2Q8TCZ2 262 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 ZKSCAN3Q9BRR0 538 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 SPZ1Q9BXG8 430 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 USP26Q9BXU7 913 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 GZF1Q9H116 711 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 PDRG1Q9NUG6 133 aa6.5□□□□□ -1.37
CTNNA1-220ENST00000520260 MYH4Q9Y623 1939 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 PHIPQ8WWQ0 1821 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 PNMA6FA0A0J9YX94 578 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 KLF18A0A0U1RQI7 1052 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ADCY3O60266 1144 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ALAS1P13196 640 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 PDIA4P13667 645 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ERCC3P19447 782 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 GNA11P29992 359 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 RRP1BQ14684 758 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 GRM4Q14833 912 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 CDC37Q16543 378 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 OLFML2BQ68BL8 750 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 KCTD1Q719H9 257 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 OTOP1Q7RTM1 612 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 GPR142Q7Z601 462 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 MTERF4Q7Z6M4 381 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ZNF467Q7Z7K2 595 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 GAS2L3Q86XJ1 694 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 CPXCR1Q8N123 301 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 FANCBQ8NB91 859 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 RGS22Q8NE09 1264 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 DNERQ8NFT8 737 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 KCNB2Q92953 911 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 TNPO1Q92973 898 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ATG4CQ96DT6 458 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ZNF274Q96GC6 653 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ZSCAN31Q96LW9 406 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 TRERF1Q96PN7 1200 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 ZIC5Q96T25 663 aa6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 RANBP17Q9H2T7 1088 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-220ENST00000520260 LY9Q9HBG7 655 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms