RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 HSP90AA1P07900 732 aaKnown RBP8.81□□□□□ -1
SDCBP-206ENST00000519115 PARP1P09874 1014 aaKnown RBP8.81□□□□□ -1
SDCBP-206ENST00000519115 FCER1AP12319 257 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 CCL5P13501 91 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 PDCP20941 246 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 UBXN2AP68543 259 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 TOB2Q14106 344 aaPredicted RBP8.81□□□□□ -1
SDCBP-206ENST00000519115 GPATCH4Q5T3I0 446 aaKnown RBP8.81□□□□□ -1
SDCBP-206ENST00000519115 BTNL9Q6UXG8 535 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 DPP9Q86TI2 863 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 STAG2Q8N3U4 1231 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 NPLOC4Q8TAT6 608 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 IGDCC4Q8TDY8 1250 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 PXYLP1Q8TE99 480 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 TCEANC2Q96MN5 208 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 MMP19Q99542 508 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 MYL10Q9BUA6 226 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 UBA5Q9GZZ9 404 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 UNC93B1Q9H1C4 597 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 FLRT1Q9NZU1 646 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 CCPG1Q9ULG6 757 aa8.81□□□□□ -1
SDCBP-206ENST00000519115 ZNF536O15090 1300 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 BRCA2P51587 3418 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 CCDC196A0A1B0GTZ2 297 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 ATP2A1O14983 1001 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 STRNO43815 780 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 FDX1P10109 184 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 XRCC5P13010 732 aaKnown RBP8.8□□□□□ -1
SDCBP-206ENST00000519115 ALAS1P13196 640 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 COPB2P35606 906 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 OAZ1P54368 228 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 HMGN5P82970 282 aaKnown RBP8.8□□□□□ -1
SDCBP-206ENST00000519115 FGD1P98174 961 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 KCTD2Q14681 263 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 ASPRV1Q53RT3 343 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 MUM1L1Q5H9M0 696 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 NFXL1Q6ZNB6 911 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 Q6ZUG5 572 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 RAB11FIP4Q86YS3 637 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 IFNLR1Q8IU57 520 aaPredicted RBP8.8□□□□□ -1
SDCBP-206ENST00000519115 ZNF654Q8IZM8 581 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 TMEM106CQ9BVX2 250 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 RNF208Q9H0X6 261 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 RANBP17Q9H2T7 1088 aaKnown RBP8.8□□□□□ -1
SDCBP-206ENST00000519115 LY9Q9HBG7 655 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 RNF146Q9NTX7 359 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 LRRC37A2A6NM11 1700 aa8.8□□□□□ -1
SDCBP-206ENST00000519115 NID2Q14112 1375 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 SH2B2O14492 632 aaPredicted RBP8.79□□□□□ -1
SDCBP-206ENST00000519115 ICAM1P05362 532 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 HOXC6P09630 235 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 CALM1P0DP23 149 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 CALM2P0DP24 149 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 CALM3P0DP25 149 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 CPA1P15085 419 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 EN2P19622 333 aaPredicted RBP8.79□□□□□ -1
SDCBP-206ENST00000519115 RXRAP19793 462 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 CYP2C19P33261 490 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 CACNB2Q08289 660 aaPredicted RBP8.79□□□□□ -1
SDCBP-206ENST00000519115 GRM4Q14833 912 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 CDC37Q16543 378 aaPredicted RBP8.79□□□□□ -1
SDCBP-206ENST00000519115 ADGRF4Q8IZF3 695 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 ABRAQ8N0Z2 381 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 FAM177A1Q8N128 213 aaPredicted RBP8.79□□□□□ -1
SDCBP-206ENST00000519115 NUP133Q8WUM0 1156 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 DDX11Q96FC9 970 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 TRERF1Q96PN7 1200 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 ACAD9Q9H845 621 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 VAT1LQ9HCJ6 419 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 MAD2L2Q9UI95 211 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 TPCN1Q9ULQ1 816 aa8.79□□□□□ -1
SDCBP-206ENST00000519115 CCDC69A6NI79 296 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 KLRF2D3W0D1 207 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 NFIBO00712 420 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 CDKL5O76039 1030 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 PTMSP20962 102 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 SMARCA1P28370 1054 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 PDIA3P30101 505 aaKnown RBP8.78□□□□□ -1
SDCBP-206ENST00000519115 CCND3P30281 292 aaPredicted RBP8.78□□□□□ -1
SDCBP-206ENST00000519115 TROAPQ12815 778 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 ME3Q16798 604 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 SLC35G1Q2M3R5 365 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 USH1GQ495M9 461 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 MAP3K21Q5TCX8 1036 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 MFSD14CQ5VZR4 134 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 CPLX2Q6PUV4 134 aaKnown RBP8.78□□□□□ -1
SDCBP-206ENST00000519115 NSMFQ6X4W1 530 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 SYNE3Q6ZMZ3 975 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 CATIPQ7Z7H3 387 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 CCDC144CPQ8IYA2 1237 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 TRMT44Q8IYL2 757 aaKnown RBP8.78□□□□□ -1
SDCBP-206ENST00000519115 ANKRD35Q8N283 1001 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 CHST13Q8NET6 341 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 GTF3C6Q969F1 213 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 SHISA4Q96DD7 197 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 MAML3Q96JK9 1138 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 DEFB118Q96PH6 123 aa8.78□□□□□ -1
SDCBP-206ENST00000519115 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.78□□□□□ -18e-21■■■■■ 43.8
SDCBP-206ENST00000519115 SLKQ9H2G2 1235 aaPredicted RBP8.78□□□□□ -1
SDCBP-206ENST00000519115 JMJD4Q9H9V9 463 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms