RNA–Protein interactions for RNA: ENST00000518872.1

SYNPO-203, Transcript of synaptopodin, humanhuman

TSL 5

Gene SYNPO, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-203ENST00000518872 PWP2Q15269 919 aaKnown RBP34.75■■■■□ 3.15
SYNPO-203ENST00000518872 SLC39A5Q6ZMH5 540 aa34.75■■■■□ 3.15
SYNPO-203ENST00000518872 TSEN34Q9BSV6 310 aaKnown RBP34.75■■■■□ 3.15
SYNPO-203ENST00000518872 ASTN1O14525 1302 aa34.75■■■■□ 3.15
SYNPO-203ENST00000518872 GOLGA8HP0CJ92 632 aa34.74■■■■□ 3.15
SYNPO-203ENST00000518872 IFIT1BQ5T764 474 aaKnown RBP34.74■■■■□ 3.15
SYNPO-203ENST00000518872 NSMFQ6X4W1 530 aa34.74■■■■□ 3.15
SYNPO-203ENST00000518872 CYB5R4Q7L1T6 521 aa34.74■■■■□ 3.15
SYNPO-203ENST00000518872 MORC4Q8TE76 937 aa34.74■■■■□ 3.15
SYNPO-203ENST00000518872 MAF1Q9H063 256 aa34.74■■■■□ 3.15
SYNPO-203ENST00000518872 SYNRGQ9UMZ2 1314 aa34.74■■■■□ 3.15
SYNPO-203ENST00000518872 ADCYAP1R1P41586 468 aa34.73■■■■□ 3.15
SYNPO-203ENST00000518872 ATN1P54259 1190 aaPredicted RBP34.73■■■■□ 3.15
SYNPO-203ENST00000518872 CCDC144BQ3MJ40 725 aa34.73■■■■□ 3.15
SYNPO-203ENST00000518872 KLHDC9Q8NEP7 349 aa34.73■■■■□ 3.15
SYNPO-203ENST00000518872 CLEC4DQ8WXI8 215 aa34.73■■■■□ 3.15
SYNPO-203ENST00000518872 LENG1Q96BZ8 264 aaPredicted RBP34.73■■■■□ 3.15
SYNPO-203ENST00000518872 NFIBO00712 420 aa34.72■■■■□ 3.15
SYNPO-203ENST00000518872 SYN1P17600 705 aa34.72■■■■□ 3.15
SYNPO-203ENST00000518872 CST5P28325 142 aaPredicted RBP34.72■■■■□ 3.15
SYNPO-203ENST00000518872 RTP1P59025 263 aa34.72■■■■□ 3.15
SYNPO-203ENST00000518872 BMP2KLQ5H9B9 411 aa34.72■■■■□ 3.15
SYNPO-203ENST00000518872 MYCNP04198 464 aaPredicted RBP34.71■■■■□ 3.15
SYNPO-203ENST00000518872 PARP1P09874 1014 aaKnown RBP34.71■■■■□ 3.15
SYNPO-203ENST00000518872 NKX3-2P78367 333 aa34.71■■■■□ 3.15
SYNPO-203ENST00000518872 UPF3AQ9H1J1 476 aaKnown RBP34.71■■■■□ 3.15
SYNPO-203ENST00000518872 ADD3Q9UEY8 706 aaKnown RBP34.71■■■■□ 3.15
SYNPO-203ENST00000518872 E7EWF7 191 aa34.7■■■■□ 3.15
SYNPO-203ENST00000518872 ADCY6O43306 1168 aa34.7■■■■□ 3.15
SYNPO-203ENST00000518872 BAATQ14032 418 aaPredicted RBP34.7■■■■□ 3.15
SYNPO-203ENST00000518872 CCSAPQ6IQ19 270 aaPredicted RBP34.7■■■■□ 3.15
SYNPO-203ENST00000518872 NCOA7Q8NI08 942 aa34.7■■■■□ 3.15
SYNPO-203ENST00000518872 UBA5Q9GZZ9 404 aa34.7■■■■□ 3.15
SYNPO-203ENST00000518872 MOXD2PA6NHM9 499 aa34.69■■■■□ 3.14
SYNPO-203ENST00000518872 MAGEA10P43363 369 aaPredicted RBP34.69■■■■□ 3.14
SYNPO-203ENST00000518872 RGS22Q8NE09 1264 aa34.69■■■■□ 3.14
SYNPO-203ENST00000518872 RBM8AQ9Y5S9 174 aaKnown RBP34.69■■■■□ 3.14
SYNPO-203ENST00000518872 GJA9P57773 515 aa34.68■■■■□ 3.14
SYNPO-203ENST00000518872 CDC37Q16543 378 aaPredicted RBP34.68■■■■□ 3.14
SYNPO-203ENST00000518872 RALYLQ86SE5 291 aaKnown RBP34.68■■■■□ 3.14
SYNPO-203ENST00000518872 ADGRF4Q8IZF3 695 aa34.68■■■■□ 3.14
SYNPO-203ENST00000518872 CPVLQ9H3G5 476 aa34.68■■■■□ 3.14
SYNPO-203ENST00000518872 TAF6LQ9Y6J9 622 aa34.68■■■■□ 3.14
SYNPO-203ENST00000518872 RNF207Q6ZRF8 634 aa34.67■■■■□ 3.14
SYNPO-203ENST00000518872 KIAA1211Q6ZU35 1233 aa34.67■■■■□ 3.14
SYNPO-203ENST00000518872 STOX1Q6ZVD7 989 aa34.67■■■■□ 3.14
SYNPO-203ENST00000518872 FERMT2Q96AC1 680 aa34.67■■■■□ 3.14
SYNPO-203ENST00000518872 ESYT1Q9BSJ8 1104 aa34.67■■■■□ 3.14
SYNPO-203ENST00000518872 SPC25Q9HBM1 224 aa34.67■■■■□ 3.14
SYNPO-203ENST00000518872 LTBP2Q14767 1821 aa34.67■■■■□ 3.14
SYNPO-203ENST00000518872 A0A1W2PQ45 241 aaPredicted RBP34.66■■■■□ 3.14
SYNPO-203ENST00000518872 A0A1W2PQY0 241 aa34.66■■■■□ 3.14
SYNPO-203ENST00000518872 ALDH5A1P51649 535 aaPredicted RBP34.66■■■■□ 3.14
SYNPO-203ENST00000518872 LSG1Q9H089 658 aaKnown RBP34.66■■■■□ 3.14
SYNPO-203ENST00000518872 VTA1Q9NP79 307 aa34.66■■■■□ 3.14
SYNPO-203ENST00000518872 PTPDC1A2A3K4 754 aa34.65■■■■□ 3.14
SYNPO-203ENST00000518872 ACLYP53396 1101 aa34.65■■■■□ 3.14
SYNPO-203ENST00000518872 RPS6P62753 249 aaKnown RBP34.65■■■■□ 3.14
SYNPO-203ENST00000518872 PCSK9Q8NBP7 692 aaKnown RBP34.65■■■■□ 3.14
SYNPO-203ENST00000518872 ATP11BQ9Y2G3 1177 aa34.65■■■■□ 3.14
SYNPO-203ENST00000518872 ABCB11O95342 1321 aa34.64■■■■□ 3.14
SYNPO-203ENST00000518872 SART3Q15020 963 aaKnown RBP34.64■■■■□ 3.14
SYNPO-203ENST00000518872 TRIM60Q495X7 471 aa34.64■■■■□ 3.14
SYNPO-203ENST00000518872 TAPT1Q6NXT6 567 aa34.64■■■■□ 3.14
SYNPO-203ENST00000518872 SLC30A10Q6XR72 485 aa34.64■■■■□ 3.14
SYNPO-203ENST00000518872 MB21D2Q8IYB1 491 aaPredicted RBP34.64■■■■□ 3.14
SYNPO-203ENST00000518872 DNERQ8NFT8 737 aa34.64■■■■□ 3.14
SYNPO-203ENST00000518872 NUP133Q8WUM0 1156 aa34.64■■■■□ 3.14
SYNPO-203ENST00000518872 PURBQ96QR8 312 aaKnown RBP34.64■■■■□ 3.14
SYNPO-203ENST00000518872 MTA3Q9BTC8 594 aa34.64■■■■□ 3.14
SYNPO-203ENST00000518872 JMJD4Q9H9V9 463 aa34.64■■■■□ 3.14
SYNPO-203ENST00000518872 GNEQ9Y223 722 aaKnown RBP34.64■■■■□ 3.14
SYNPO-203ENST00000518872 ERICH2A1L162 156 aa34.63■■■■□ 3.13
SYNPO-203ENST00000518872 IFIT3O14879 490 aaKnown RBP34.63■■■■□ 3.13
SYNPO-203ENST00000518872 TNFAIP2Q03169 654 aa34.63■■■■□ 3.13
SYNPO-203ENST00000518872 KCNA10Q16322 511 aa34.63■■■■□ 3.13
SYNPO-203ENST00000518872 IQSEC1Q6DN90 963 aa34.63■■■■□ 3.13
SYNPO-203ENST00000518872 MAD2L2Q9UI95 211 aa34.63■■■■□ 3.13
SYNPO-203ENST00000518872 PALM3A6NDB9 673 aaPredicted RBP34.62■■■■□ 3.13
SYNPO-203ENST00000518872 MYADML2A6NDP7 307 aa34.62■■■■□ 3.13
SYNPO-203ENST00000518872 C6orf222P0C671 652 aaPredicted RBP34.62■■■■□ 3.13
SYNPO-203ENST00000518872 QRICH1Q2TAL8 776 aa34.62■■■■□ 3.13
SYNPO-203ENST00000518872 USH1GQ495M9 461 aa34.62■■■■□ 3.13
SYNPO-203ENST00000518872 STAG2Q8N3U4 1231 aa34.62■■■■□ 3.13
SYNPO-203ENST00000518872 MTMR8Q96EF0 704 aa34.62■■■■□ 3.13
SYNPO-203ENST00000518872 PRKAG2Q9UGJ0 569 aa34.62■■■■□ 3.13
SYNPO-203ENST00000518872 Q9Y3F1 56 aa34.62■■■■□ 3.13
SYNPO-203ENST00000518872 C11orf97A0A1B0GVM6 126 aaPredicted RBP34.61■■■■□ 3.13
SYNPO-203ENST00000518872 CTAGE5O15320 804 aa34.61■■■■□ 3.13
SYNPO-203ENST00000518872 LAMA3Q16787 3333 aa34.61■■■■□ 3.13
SYNPO-203ENST00000518872 ELP1O95163 1332 aa34.6■■■■□ 3.13
SYNPO-203ENST00000518872 KLRF2D3W0D1 207 aa34.6■■■■□ 3.13
SYNPO-203ENST00000518872 EDNRBP24530 442 aa34.6■■■■□ 3.13
SYNPO-203ENST00000518872 CALML3P27482 149 aa34.6■■■■□ 3.13
SYNPO-203ENST00000518872 ANTXR2P58335 489 aa34.6■■■■□ 3.13
SYNPO-203ENST00000518872 GRM4Q14833 912 aa34.6■■■■□ 3.13
SYNPO-203ENST00000518872 WTAPQ15007 396 aa34.6■■■■□ 3.13
SYNPO-203ENST00000518872 FBXO16Q8IX29 292 aaPredicted RBP34.6■■■■□ 3.13
SYNPO-203ENST00000518872 MPHOSPH6Q99547 160 aaKnown RBP34.6■■■■□ 3.13
SYNPO-203ENST00000518872 STARD7Q9NQZ5 370 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms