RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 PDGFDQ9GZP0 370 aaPredicted RBP9.09□□□□□ -0.95
ARFGEF1-204ENST00000518290 CLIP2Q9UDT6 1046 aa9.09□□□□□ -0.95
ARFGEF1-204ENST00000518290 STK17AQ9UEE5 414 aa9.09□□□□□ -0.95
ARFGEF1-204ENST00000518290 HDAC9Q9UKV0 1011 aa9.09□□□□□ -0.95
ARFGEF1-204ENST00000518290 COL11A1P12107 1806 aaPredicted RBP9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 A0A1B0GTH6 734 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 CBFA2T2O43439 604 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 TRAF1Q13077 416 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 CCDC144BQ3MJ40 725 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 ZNF658Q5TYW1 1059 aaPredicted RBP9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 LRRC8AQ8IWT6 810 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 CCDC150Q8NCX0 1101 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 LRRC15Q8TF66 581 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 RANBP17Q9H2T7 1088 aaKnown RBP9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 PIM2Q9P1W9 311 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 RWDD2AQ9UIY3 292 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 STK24Q9Y6E0 443 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 PHF20L1A8MW92 1017 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 FZD9O00144 591 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 GTF2F1P35269 517 aaKnown RBP eCLIP9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 JAG1P78504 1218 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 ABCB5Q2M3G0 1257 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 DTHD1Q6ZMT9 781 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 VSTM4Q8IW00 320 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 DPF2Q92785 391 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 CUL5Q93034 780 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 INTS13Q9NVM9 706 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 SIP14410 1827 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 WDR81Q562E7 1941 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 ARID2Q68CP9 1835 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 NFKBIEO00221 500 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 GOLGA8HP0CJ92 632 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 FMR1Q06787 632 aaKnown RBP eCLIP9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 SPATA1Q5VX52 437 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 FCHSD1Q86WN1 690 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 LRRC47Q8N1G4 583 aaKnown RBP9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 TEPSINQ96N21 525 aa9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 LIMA1Q9UHB6 759 aaKnown RBP9.08□□□□□ -0.96
ARFGEF1-204ENST00000518290 ABCB11O95342 1321 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 BAZ2BQ9UIF8 2168 aaKnown RBP9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 VWA3AA6NCI4 1184 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 G3V3G9 751 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 OPLAHO14841 1288 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 ICA1Q05084 483 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 SF3B2Q13435 895 aaKnown RBP9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 SEPT2Q15019 361 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 INF2Q27J81 1249 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 DCAF8Q5TAQ9 597 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 F8W031 263 aaPredicted RBP9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 MEIS2O14770 477 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 MCM7P33993 719 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 SREBF1P36956 1147 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 FANCCQ00597 558 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 GIMAP8Q8ND71 665 aaPredicted RBP9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 TBCKQ8TEA7 893 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 TRIM5Q9C035 493 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 TDRD3Q9H7E2 651 aaKnown RBP9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 ZNF112Q9UJU3 913 aa9.07□□□□□ -0.96
ARFGEF1-204ENST00000518290 BECN2A8MW95 431 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 NDUFB10O96000 172 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 TXLNAP40222 546 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 PTGER2P43116 358 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 MRPL12P52815 198 aaKnown RBP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 NR1I3Q14994 352 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 SLFN13Q68D06 897 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 ZC3H3Q8IXZ2 948 aaKnown RBP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 FRMPD2Q68DX3 1309 aaPredicted RBP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 SSC5DA1L4H1 1573 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 FOSP01100 380 aaPredicted RBP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 TUBB4AP04350 444 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 MUTP22033 750 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 SPIRE1Q08AE8 756 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 NOLC1Q14978 699 aaKnown RBP eCLIP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 QRICH1Q2TAL8 776 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 RBM26Q5T8P6 1007 aaKnown RBP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 TMEM139Q8IV31 216 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 NIM1KQ8IY84 436 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 ADSSL1Q8N142 457 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 ETNPPLQ8TBG4 499 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 HAS1Q92839 578 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 XPO4Q9C0E2 1151 aaKnown RBP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 ZBTB21Q9ULJ3 1066 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 RPTORQ8N122 1335 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 PVALEFA0A1B0GWK0 134 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 FRMD3A2A2Y4 597 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 USP17L10C9JJH3 530 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 F5H6K3 240 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 PTGS1P23219 599 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 KLRC3Q07444 240 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 TNIP1Q15025 636 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 SLC4A8Q2Y0W8 1093 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 SPECC1Q5M775 1068 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 SYDE2Q5VT97 1194 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 RASGRP4Q8TDF6 673 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 CACTINQ8WUQ7 758 aaKnown RBP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 ERCC4Q92889 916 aaPredicted RBP9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 LENG9Q96B70 501 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 DHX58Q96C10 678 aa9.06□□□□□ -0.96
ARFGEF1-204ENST00000518290 MAP3K20Q9NYL2 800 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms