RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 LRRC41Q15345 812 aa16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 CDC37Q16543 378 aaPredicted RBP16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 TMEM67Q5HYA8 995 aa16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 ARRDC4Q8NCT1 418 aa16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 IGDCC4Q8TDY8 1250 aa16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 SENP6Q9GZR1 1112 aaPredicted RBP16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 KATNBL1Q9H079 304 aa16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 JMJD4Q9H9V9 463 aa16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 GPHNQ9NQX3 736 aaPredicted RBP16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 ZNFX1Q9P2E3 1918 aaKnown RBP16.46■□□□□ 0.23
PDGFRB-202ENST00000517488 ERICH2A1L162 156 aa16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 PALM3A6NDB9 673 aaPredicted RBP16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 PGK1P00558 417 aa16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 SART3Q15020 963 aaKnown RBP16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 LRRC26Q2I0M4 334 aa16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 USH1GQ495M9 461 aa16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 CASC1Q6TDU7 716 aa16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 ABHD16BQ9H3Z7 469 aa16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 XPNPEP3Q9NQH7 507 aa16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 PNMA2Q9UL42 364 aa16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 FAM184BQ9ULE4 1060 aa16.45■□□□□ 0.22
PDGFRB-202ENST00000517488 PTPDC1A2A3K4 754 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 KLRF2D3W0D1 207 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 PRC1O43663 620 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 DHX16O60231 1041 aaKnown RBP16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 TROAPQ12815 778 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 GRM4Q14833 912 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 SLC35G1Q2M3R5 365 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 QRICH1Q2TAL8 776 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 SLC30A10Q6XR72 485 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 C7orf61Q8IZ16 206 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 LY9Q9HBG7 655 aa16.44■□□□□ 0.22
PDGFRB-202ENST00000517488 ASB14A6NK59 587 aa16.43■□□□□ 0.22
PDGFRB-202ENST00000517488 KBTBD13C9JR72 458 aa16.43■□□□□ 0.22
PDGFRB-202ENST00000517488 ADCY6O43306 1168 aa16.43■□□□□ 0.22
PDGFRB-202ENST00000517488 CALML3P27482 149 aa16.43■□□□□ 0.22
PDGFRB-202ENST00000517488 ATN1P54259 1190 aaPredicted RBP16.43■□□□□ 0.22
PDGFRB-202ENST00000517488 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
PDGFRB-202ENST00000517488 RNF207Q6ZRF8 634 aa16.43■□□□□ 0.22
PDGFRB-202ENST00000517488 PPP4R2Q9NY27 417 aa16.43■□□□□ 0.22
PDGFRB-202ENST00000517488 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 SMCHD1A6NHR9 2005 aa16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 ADAMTS4O75173 837 aa16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 CENPBP07199 599 aaPredicted RBP16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 MCM5P33992 734 aa16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 ADCYAP1R1P41586 468 aa16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 IRX5P78411 483 aaPredicted RBP16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 CATIPQ7Z7H3 387 aa16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 TBC1D5Q92609 795 aa16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 FERMT2Q96AC1 680 aa16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 MTMR8Q96EF0 704 aa16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 ZMYND8Q9ULU4 1186 aaPredicted RBP16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 COLQQ9Y215 455 aaPredicted RBP16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 RANBP2P49792 3224 aaKnown RBP16.42■□□□□ 0.22
PDGFRB-202ENST00000517488 SH2B2O14492 632 aaPredicted RBP16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 DUSP11O75319 330 aaKnown RBP16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 ALDH5A1P51649 535 aaPredicted RBP16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 CHRDL2Q6WN34 429 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 EEPD1Q7L9B9 569 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 RNF180Q86T96 592 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 FBXO11Q86XK2 927 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 FBXO16Q8IX29 292 aaPredicted RBP16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 RGS22Q8NE09 1264 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 MORC4Q8TE76 937 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 MYL10Q9BUA6 226 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 PDGFCQ9NRA1 345 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 ABCB11O95342 1321 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
PDGFRB-202ENST00000517488 PLXNA1Q9UIW2 1896 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 MYADML2A6NDP7 307 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 CYTH3O43739 400 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 SLC34A2O95436 690 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 SYN1P17600 705 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 PTGS1P23219 599 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 RNF20Q5VTR2 975 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 ERICH6BQ5W0A0 696 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 TAPT1Q6NXT6 567 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 ZNF654Q8IZM8 581 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 KLHDC9Q8NEP7 349 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 TMEM87BQ96K49 555 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 MTA3Q9BTC8 594 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 ADD3Q9UEY8 706 aaKnown RBP16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 PHF24Q9UPV7 400 aa16.4■□□□□ 0.22
PDGFRB-202ENST00000517488 ZBTB5O15062 677 aa16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 RTP1P59025 263 aa16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 TNFAIP2Q03169 654 aa16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 HABP4Q5JVS0 413 aaKnown RBP16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 TMEM63BQ5T3F8 832 aa16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 SLC39A5Q6ZMH5 540 aa16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 NFXL1Q6ZNB6 911 aa16.39■□□□□ 0.21
PDGFRB-202ENST00000517488 HOMER1Q86YM7 354 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms