RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 RIOX1Q9H6W3 641 aa30.14■■■□□ 2.42
DDR1-279ENST00000515529 A1CFQ9NQ94 594 aaKnown RBP30.14■■■□□ 2.42
DDR1-279ENST00000515529 ABCB11O95342 1321 aa30.14■■■□□ 2.42
DDR1-279ENST00000515529 HTTP42858 3142 aa30.13■■■□□ 2.41
DDR1-279ENST00000515529 POTEB2H3BUK9 544 aa30.13■■■□□ 2.41
DDR1-279ENST00000515529 TRIM32Q13049 653 aa30.13■■■□□ 2.41
DDR1-279ENST00000515529 ZNF792Q3KQV3 632 aa30.13■■■□□ 2.41
DDR1-279ENST00000515529 SPZ1Q9BXG8 430 aa30.13■■■□□ 2.41
DDR1-279ENST00000515529 UPF3BQ9BZI7 483 aaKnown RBP30.13■■■□□ 2.41
DDR1-279ENST00000515529 UNC93B1Q9H1C4 597 aa30.13■■■□□ 2.41
DDR1-279ENST00000515529 HMX1Q9NP08 348 aaPredicted RBP30.13■■■□□ 2.41
DDR1-279ENST00000515529 RBM28Q9NW13 759 aaKnown RBP30.13■■■□□ 2.41
DDR1-279ENST00000515529 FLRT1Q9NZU1 646 aa30.13■■■□□ 2.41
DDR1-279ENST00000515529 BRPF3Q9ULD4 1205 aa30.13■■■□□ 2.41
DDR1-279ENST00000515529 GOLGA8AA7E2F4 631 aa30.12■■■□□ 2.41
DDR1-279ENST00000515529 GOLGA8BA8MQT2 603 aa30.12■■■□□ 2.41
DDR1-279ENST00000515529 SMARCA1P28370 1054 aa30.12■■■□□ 2.41
DDR1-279ENST00000515529 APOBRQ0VD83 1088 aa30.12■■■□□ 2.41
DDR1-279ENST00000515529 RTN1Q16799 776 aa30.12■■■□□ 2.41
DDR1-279ENST00000515529 IFFO2Q5TF58 517 aa30.12■■■□□ 2.41
DDR1-279ENST00000515529 RRP36Q96EU6 259 aaKnown RBP30.12■■■□□ 2.41
DDR1-279ENST00000515529 PIGSQ96S52 555 aa30.12■■■□□ 2.41
DDR1-279ENST00000515529 SEC63Q9UGP8 760 aaKnown RBP30.12■■■□□ 2.41
DDR1-279ENST00000515529 MRPL11Q9Y3B7 192 aaKnown RBP30.12■■■□□ 2.41
DDR1-279ENST00000515529 PTPDC1A2A3K4 754 aa30.11■■■□□ 2.41
DDR1-279ENST00000515529 RCAN1P53805 252 aa30.11■■■□□ 2.41
DDR1-279ENST00000515529 FBXL16Q8N461 479 aa30.11■■■□□ 2.41
DDR1-279ENST00000515529 PIBF1Q8WXW3 757 aa30.11■■■□□ 2.41
DDR1-279ENST00000515529 MTMR8Q96EF0 704 aa30.11■■■□□ 2.41
DDR1-279ENST00000515529 PDRG1Q9NUG6 133 aa30.11■■■□□ 2.41
DDR1-279ENST00000515529 RPTORQ8N122 1335 aa30.11■■■□□ 2.41
DDR1-279ENST00000515529 DNAJC25-GNG10A0A024R161 153 aa30.1■■■□□ 2.41
DDR1-279ENST00000515529 NFIBO00712 420 aa30.1■■■□□ 2.41
DDR1-279ENST00000515529 PLEKHA8P1O95397 391 aa30.1■■■□□ 2.41
DDR1-279ENST00000515529 CYP2C19P33261 490 aa30.1■■■□□ 2.41
DDR1-279ENST00000515529 CACNB2Q08289 660 aaPredicted RBP30.1■■■□□ 2.41
DDR1-279ENST00000515529 CYP39A1Q9NYL5 469 aa30.1■■■□□ 2.41
DDR1-279ENST00000515529 ZNFX1Q9P2E3 1918 aaKnown RBP30.1■■■□□ 2.41
DDR1-279ENST00000515529 PNMA6FA0A0J9YX94 578 aa30.09■■■□□ 2.41
DDR1-279ENST00000515529 CYTH3O43739 400 aa30.09■■■□□ 2.41
DDR1-279ENST00000515529 METAP2P50579 478 aaKnown RBP eCLIP30.09■■■□□ 2.41
DDR1-279ENST00000515529 TMTC3Q6ZXV5 915 aa30.09■■■□□ 2.41
DDR1-279ENST00000515529 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.09■■■□□ 2.419e-6■■■■■ 32.4
DDR1-279ENST00000515529 PCDHA1Q9Y5I3 950 aa30.09■■■□□ 2.41
DDR1-279ENST00000515529 CCDC196A0A1B0GTZ2 297 aa30.08■■■□□ 2.41
DDR1-279ENST00000515529 SLC35G1Q2M3R5 365 aa30.08■■■□□ 2.41
DDR1-279ENST00000515529 MAP3K21Q5TCX8 1036 aa30.08■■■□□ 2.41
DDR1-279ENST00000515529 RNF207Q6ZRF8 634 aa30.08■■■□□ 2.41
DDR1-279ENST00000515529 MCF2L2Q86YR7 1114 aa30.08■■■□□ 2.41
DDR1-279ENST00000515529 SRBD1Q8N5C6 995 aaKnown RBP30.08■■■□□ 2.41
DDR1-279ENST00000515529 CLEC4DQ8WXI8 215 aa30.08■■■□□ 2.41
DDR1-279ENST00000515529 TINF2Q9BSI4 451 aa30.08■■■□□ 2.41
DDR1-279ENST00000515529 AGXT2Q9BYV1 514 aa30.08■■■□□ 2.41
DDR1-279ENST00000515529 UPF2Q9HAU5 1272 aaKnown RBP30.08■■■□□ 2.41
DDR1-279ENST00000515529 CNTN2Q02246 1040 aa30.07■■■□□ 2.4
DDR1-279ENST00000515529 BAATQ14032 418 aaPredicted RBP30.07■■■□□ 2.4
DDR1-279ENST00000515529 PPP2R5BQ15173 497 aa30.07■■■□□ 2.4
DDR1-279ENST00000515529 ZNF467Q7Z7K2 595 aaPredicted RBP30.07■■■□□ 2.4
DDR1-279ENST00000515529 CMTR1Q8N1G2 835 aaKnown RBP30.07■■■□□ 2.4
DDR1-279ENST00000515529 CCDC82Q8N4S0 544 aa30.07■■■□□ 2.4
DDR1-279ENST00000515529 MSL3Q8N5Y2 521 aaKnown RBP30.07■■■□□ 2.4
DDR1-279ENST00000515529 CNPY2Q9Y2B0 182 aa30.07■■■□□ 2.4
DDR1-279ENST00000515529 GJB1P08034 283 aa30.06■■■□□ 2.4
DDR1-279ENST00000515529 CALML3P27482 149 aa30.06■■■□□ 2.4
DDR1-279ENST00000515529 CNGA1P29973 690 aa30.06■■■□□ 2.4
DDR1-279ENST00000515529 FAM133AQ8N9E0 248 aa30.06■■■□□ 2.4
DDR1-279ENST00000515529 MYH6P13533 1939 aa30.05■■■□□ 2.4
DDR1-279ENST00000515529 POTEFA5A3E0 1075 aa30.05■■■□□ 2.4
DDR1-279ENST00000515529 RGS22Q8NE09 1264 aa30.05■■■□□ 2.4
DDR1-279ENST00000515529 DEFB118Q96PH6 123 aa30.05■■■□□ 2.4
DDR1-279ENST00000515529 MAF1Q9H063 256 aa30.05■■■□□ 2.4
DDR1-279ENST00000515529 ADD3Q9UEY8 706 aaKnown RBP30.05■■■□□ 2.4
DDR1-279ENST00000515529 PLXNA1Q9UIW2 1896 aa30.05■■■□□ 2.4
DDR1-279ENST00000515529 SYNGAP1Q96PV0 1343 aa30.04■■■□□ 2.4
DDR1-279ENST00000515529 TOB2Q14106 344 aaPredicted RBP30.04■■■□□ 2.4
DDR1-279ENST00000515529 PAK6Q9NQU5 681 aaPredicted RBP30.04■■■□□ 2.4
DDR1-279ENST00000515529 BAZ2BQ9UIF8 2168 aaKnown RBP30.03■■■□□ 2.4
DDR1-279ENST00000515529 ASB14A6NK59 587 aa30.03■■■□□ 2.4
DDR1-279ENST00000515529 PPP1R11O60927 126 aaPredicted RBP30.03■■■□□ 2.4
DDR1-279ENST00000515529 CCND3P30281 292 aaPredicted RBP30.03■■■□□ 2.4
DDR1-279ENST00000515529 RPS6P62753 249 aaKnown RBP30.03■■■□□ 2.4
DDR1-279ENST00000515529 SLC30A10Q6XR72 485 aa30.03■■■□□ 2.4
DDR1-279ENST00000515529 U2AF1L4Q8WU68 220 aaKnown RBP30.03■■■□□ 2.4
DDR1-279ENST00000515529 NRBP1Q9UHY1 535 aa30.03■■■□□ 2.4
DDR1-279ENST00000515529 SMCHD1A6NHR9 2005 aa30.03■■■□□ 2.4
DDR1-279ENST00000515529 IGHA2P01877 340 aa30.02■■■□□ 2.4
DDR1-279ENST00000515529 CYBAP13498 195 aa30.02■■■□□ 2.4
DDR1-279ENST00000515529 ANKRD1Q15327 319 aa30.02■■■□□ 2.4
DDR1-279ENST00000515529 MAMDC4Q6UXC1 1216 aa30.02■■■□□ 2.4
DDR1-279ENST00000515529 IL17RAQ96F46 866 aa30.02■■■□□ 2.4
DDR1-279ENST00000515529 MPHOSPH6Q99547 160 aaKnown RBP30.02■■■□□ 2.4
DDR1-279ENST00000515529 CFBP00751 764 aa30.01■■■□□ 2.39
DDR1-279ENST00000515529 TFRCP02786 760 aaKnown RBP30.01■■■□□ 2.39
DDR1-279ENST00000515529 GJA8P48165 433 aa30.01■■■□□ 2.39
DDR1-279ENST00000515529 ARMCX2Q7L311 632 aa30.01■■■□□ 2.39
DDR1-279ENST00000515529 C22orf23Q9BZE7 217 aa30.01■■■□□ 2.39
DDR1-279ENST00000515529 SOWAHBA6NEL2 793 aa30■■■□□ 2.39
DDR1-279ENST00000515529 MSCO60682 206 aa30■■■□□ 2.39
DDR1-279ENST00000515529 SGPL1O95470 568 aa30■■■□□ 2.39
DDR1-279ENST00000515529 EN2P19622 333 aaPredicted RBP30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms