RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 DIS3Q9Y2L1 958 aaKnown RBP11.82□□□□□ -0.52
PTPN20-221ENST00000509599 FLT1P17948 1338 aa11.82□□□□□ -0.52
PTPN20-221ENST00000509599 LCHNA4D1U4 455 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 H3BQ06 376 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-221ENST00000509599 CTAGE5O15320 804 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 GSTO1P78417 241 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 RAB3GAP1Q15042 981 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 PUS10Q3MIT2 529 aaKnown RBP11.81□□□□□ -0.52
PTPN20-221ENST00000509599 HERC4Q5GLZ8 1057 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-221ENST00000509599 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 NUDT18Q6ZVK8 323 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 ASCL5Q7RTU5 278 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 HERC6Q8IVU3 1022 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 MMP19Q99542 508 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 SIL1Q9H173 461 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 TRPV6Q9H1D0 765 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 CEP126Q9P2H0 1117 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 PRKAG3Q9UGI9 489 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 GRIN2DO15399 1336 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 WDR87Q6ZQQ6 2873 aa11.81□□□□□ -0.52
PTPN20-221ENST00000509599 DMXL1Q9Y485 3027 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 B4GALT4O60513 344 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 ID4P47928 161 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 GJA9P57773 515 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 GNASQ5JWF2 1037 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 TATDN1Q6P1N9 297 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 PI16Q6UXB8 463 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 DEFB128Q7Z7B8 93 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 ADHFE1Q8IWW8 467 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 CCER1Q8TC90 406 aaPredicted RBP11.8□□□□□ -0.52
PTPN20-221ENST00000509599 PHOSPHO2Q8TCD6 241 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 TANGO6Q9C0B7 1094 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 SUGCTQ9HAC7 445 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 SAP30BPQ9UHR5 308 aaKnown RBP11.8□□□□□ -0.52
PTPN20-221ENST00000509599 ACACBO00763 2458 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 MYH8P13535 1937 aa11.8□□□□□ -0.52
PTPN20-221ENST00000509599 PKD1L2Q7Z442 2459 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 MED19A0JLT2 244 aaPredicted RBP11.79□□□□□ -0.52
PTPN20-221ENST00000509599 PFKMP08237 780 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 GUCY1A2P33402 732 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 KIAA1755Q5JYT7 1200 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 EDAQ92838 391 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 PBXIP1Q96AQ6 731 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 ATG4CQ96DT6 458 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 UPF3BQ9BZI7 483 aaKnown RBP11.79□□□□□ -0.52
PTPN20-221ENST00000509599 AATFQ9NY61 560 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTPN20-221ENST00000509599 ZHX1Q9UKY1 873 aaPredicted RBP11.79□□□□□ -0.52
PTPN20-221ENST00000509599 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 ZNF292O60281 2723 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 CHD6Q8TD26 2715 aa11.79□□□□□ -0.52
PTPN20-221ENST00000509599 CHD8Q9HCK8 2581 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 DMDP11532 3685 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 KIF28PB7ZC32 967 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 PROB1E7EW31 1015 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 CIAO1O76071 339 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 BEX3Q00994 111 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 ITGA7Q13683 1181 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 TMEM132BQ14DG7 1078 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 CXCL17Q6UXB2 119 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 Q6ZNB5 142 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 ATOH1Q92858 354 aaPredicted RBP11.78□□□□□ -0.52
PTPN20-221ENST00000509599 SPC25Q9HBM1 224 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 HMG20BQ9P0W2 317 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 MTUS1Q9ULD2 1270 aa11.78□□□□□ -0.52
PTPN20-221ENST00000509599 CFAP47Q6ZTR5 3102 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 PRR23AA6NEV1 266 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 TMEM221A6NGB7 291 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 M0R296 226 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 SLC25A27O95847 323 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 HLA-DOAP06340 250 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 TIMM10P62072 90 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 NKX3-2P78367 333 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 KCTD2Q14681 263 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 PKN1Q16512 942 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 RNF135Q8IUD6 432 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 SUGP1Q8IWZ8 645 aaKnown RBP11.77□□□□□ -0.53
PTPN20-221ENST00000509599 WWC1Q8IX03 1113 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 MTRQ99707 1265 aa11.77□□□□□ -0.53
PTPN20-221ENST00000509599 MAP1BP46821 2468 aaKnown RBP11.77□□□□□ -0.53
PTPN20-221ENST00000509599 NLRC5Q86WI3 1866 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 ATRXP46100 2492 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 ACTN1P12814 892 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 VCPP55072 806 aaKnown RBP11.76□□□□□ -0.53
PTPN20-221ENST00000509599 EXOSC9Q06265 439 aaKnown RBP11.76□□□□□ -0.53
PTPN20-221ENST00000509599 MAMDC4Q6UXC1 1216 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 ADGRA1Q86SQ6 560 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 RIOX2Q8IUF8 465 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 FBXL6Q8N531 539 aa11.76□□□□□ -0.53
PTPN20-221ENST00000509599 MSL3Q8N5Y2 521 aaKnown RBP11.76□□□□□ -0.53
PTPN20-221ENST00000509599 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms