RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 HOMER2Q9NSB8 354 aa23.11■■□□□ 1.29
SNX25-204ENST00000506896 PLXNA1Q9UIW2 1896 aa23.11■■□□□ 1.29
SNX25-204ENST00000506896 CYP2C19P33261 490 aa23.1■■□□□ 1.29
SNX25-204ENST00000506896 GNAQP50148 359 aa23.1■■□□□ 1.29
SNX25-204ENST00000506896 MNX1P50219 401 aaPredicted RBP23.1■■□□□ 1.29
SNX25-204ENST00000506896 DDX11Q96FC9 970 aa23.1■■□□□ 1.29
SNX25-204ENST00000506896 TCEANC2Q96MN5 208 aa23.1■■□□□ 1.29
SNX25-204ENST00000506896 TRERF1Q96PN7 1200 aa23.1■■□□□ 1.29
SNX25-204ENST00000506896 CPVLQ9H3G5 476 aa23.1■■□□□ 1.29
SNX25-204ENST00000506896 ZSWIM6Q9HCJ5 1215 aa23.1■■□□□ 1.29
SNX25-204ENST00000506896 DIS3Q9Y2L1 958 aaKnown RBP23.1■■□□□ 1.29
SNX25-204ENST00000506896 SMARCA1P28370 1054 aa23.09■■□□□ 1.29
SNX25-204ENST00000506896 APOA5Q6Q788 366 aa23.09■■□□□ 1.29
SNX25-204ENST00000506896 RUFY3Q7L099 469 aa23.09■■□□□ 1.29
SNX25-204ENST00000506896 ANKRD35Q8N283 1001 aa23.09■■□□□ 1.29
SNX25-204ENST00000506896 MAML3Q96JK9 1138 aa23.09■■□□□ 1.29
SNX25-204ENST00000506896 MYL10Q9BUA6 226 aa23.09■■□□□ 1.29
SNX25-204ENST00000506896 JMJD4Q9H9V9 463 aa23.09■■□□□ 1.29
SNX25-204ENST00000506896 CYP46A1Q9Y6A2 500 aa23.09■■□□□ 1.29
SNX25-204ENST00000506896 CEP290O15078 2479 aa23.09■■□□□ 1.29
SNX25-204ENST00000506896 PFASO15067 1338 aa23.08■■□□□ 1.29
SNX25-204ENST00000506896 RCAN1P53805 252 aa23.08■■□□□ 1.29
SNX25-204ENST00000506896 ZNF792Q3KQV3 632 aa23.08■■□□□ 1.29
SNX25-204ENST00000506896 C8orf34Q49A92 452 aa23.08■■□□□ 1.29
SNX25-204ENST00000506896 TRPV1Q8NER1 839 aa23.08■■□□□ 1.29
SNX25-204ENST00000506896 MTMR8Q96EF0 704 aa23.08■■□□□ 1.29
SNX25-204ENST00000506896 RIOX1Q9H6W3 641 aa23.08■■□□□ 1.29
SNX25-204ENST00000506896 VAT1LQ9HCJ6 419 aa23.08■■□□□ 1.29
SNX25-204ENST00000506896 DNAJC25-GNG10A0A024R161 153 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 PGK2P07205 417 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 CPA1P15085 419 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 TRAF1Q13077 416 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 QRICH1Q2TAL8 776 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 Q6ZUG5 572 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 FANCBQ8NB91 859 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 PAWRQ96IZ0 340 aaKnown RBP23.07■■□□□ 1.28
SNX25-204ENST00000506896 AGXT2Q9BYV1 514 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 MAF1Q9H063 256 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 SMCHD1A6NHR9 2005 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 FRMPD3Q5JV73 1810 aa23.07■■□□□ 1.28
SNX25-204ENST00000506896 ZBTB5O15062 677 aa23.06■■□□□ 1.28
SNX25-204ENST00000506896 ZBTB43O43298 467 aa23.06■■□□□ 1.28
SNX25-204ENST00000506896 CYBAP13498 195 aa23.06■■□□□ 1.28
SNX25-204ENST00000506896 MICU3Q86XE3 530 aa23.06■■□□□ 1.28
SNX25-204ENST00000506896 FBXO11Q86XK2 927 aa23.06■■□□□ 1.28
SNX25-204ENST00000506896 DIS3LQ8TF46 1054 aaKnown RBP23.06■■□□□ 1.28
SNX25-204ENST00000506896 HTATIP2Q9BUP3 242 aa23.06■■□□□ 1.28
SNX25-204ENST00000506896 SPZ1Q9BXG8 430 aa23.06■■□□□ 1.28
SNX25-204ENST00000506896 A1CFQ9NQ94 594 aaKnown RBP23.06■■□□□ 1.28
SNX25-204ENST00000506896 RBM28Q9NW13 759 aaKnown RBP23.06■■□□□ 1.28
SNX25-204ENST00000506896 ABCB11O95342 1321 aa23.06■■□□□ 1.28
SNX25-204ENST00000506896 KLF18A0A0U1RQI7 1052 aa23.05■■□□□ 1.28
SNX25-204ENST00000506896 SEC24BO95487 1268 aa23.05■■□□□ 1.28
SNX25-204ENST00000506896 MUM1L1Q5H9M0 696 aa23.05■■□□□ 1.28
SNX25-204ENST00000506896 NECAB2Q7Z6G3 386 aa23.05■■□□□ 1.28
SNX25-204ENST00000506896 ZNF467Q7Z7K2 595 aaPredicted RBP23.05■■□□□ 1.28
SNX25-204ENST00000506896 MSL3Q8N5Y2 521 aaKnown RBP23.05■■□□□ 1.28
SNX25-204ENST00000506896 BRF1Q92994 677 aa23.05■■□□□ 1.28
SNX25-204ENST00000506896 IL17RAQ96F46 866 aa23.05■■□□□ 1.28
SNX25-204ENST00000506896 AMNQ9BXJ7 453 aa23.05■■□□□ 1.28
SNX25-204ENST00000506896 BRPF3Q9ULD4 1205 aa23.05■■□□□ 1.28
SNX25-204ENST00000506896 ALPK3Q96L96 1907 aa23.04■■□□□ 1.28
SNX25-204ENST00000506896 CYTH3O43739 400 aa23.04■■□□□ 1.28
SNX25-204ENST00000506896 RXRAP19793 462 aa23.04■■□□□ 1.28
SNX25-204ENST00000506896 PPP2R5BQ15173 497 aa23.04■■□□□ 1.28
SNX25-204ENST00000506896 USH1GQ495M9 461 aa23.04■■□□□ 1.28
SNX25-204ENST00000506896 DDX20Q9UHI6 824 aaKnown RBP23.04■■□□□ 1.28
SNX25-204ENST00000506896 PNMA6FA0A0J9YX94 578 aa23.03■■□□□ 1.28
SNX25-204ENST00000506896 POTEB2H3BUK9 544 aa23.03■■□□□ 1.28
SNX25-204ENST00000506896 CCDC144CPQ8IYA2 1237 aa23.03■■□□□ 1.28
SNX25-204ENST00000506896 RGS22Q8NE09 1264 aa23.03■■□□□ 1.28
SNX25-204ENST00000506896 CLEC4DQ8WXI8 215 aa23.03■■□□□ 1.28
SNX25-204ENST00000506896 DPF3Q92784 378 aa23.03■■□□□ 1.28
SNX25-204ENST00000506896 TINF2Q9BSI4 451 aa23.03■■□□□ 1.28
SNX25-204ENST00000506896 CYP39A1Q9NYL5 469 aa23.03■■□□□ 1.28
SNX25-204ENST00000506896 MRPL11Q9Y3B7 192 aaKnown RBP23.03■■□□□ 1.28
SNX25-204ENST00000506896 MYH6P13533 1939 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 NFIBO00712 420 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 MSCO60682 206 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 CNGA1P29973 690 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 RTN1Q16799 776 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 SLC35G1Q2M3R5 365 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 PRAMEF19Q5SWL8 479 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 NSMFQ6X4W1 530 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 TMTC3Q6ZXV5 915 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 HOMER1Q86YM7 354 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 MCF2L2Q86YR7 1114 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 RRP36Q96EU6 259 aaKnown RBP23.02■■□□□ 1.28
SNX25-204ENST00000506896 PIGSQ96S52 555 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 UPF3BQ9BZI7 483 aaKnown RBP23.02■■□□□ 1.28
SNX25-204ENST00000506896 NRBP1Q9UHY1 535 aa23.02■■□□□ 1.28
SNX25-204ENST00000506896 CCDC196A0A1B0GTZ2 297 aa23.01■■□□□ 1.27
SNX25-204ENST00000506896 COL6A1P12109 1028 aa23.01■■□□□ 1.27
SNX25-204ENST00000506896 TAL1P17542 331 aaPredicted RBP23.01■■□□□ 1.27
SNX25-204ENST00000506896 EVCP57679 992 aa23.01■■□□□ 1.27
SNX25-204ENST00000506896 APOBRQ0VD83 1088 aa23.01■■□□□ 1.27
SNX25-204ENST00000506896 MAMDC4Q6UXC1 1216 aa23.01■■□□□ 1.27
SNX25-204ENST00000506896 RAB11FIP4Q86YS3 637 aa23.01■■□□□ 1.27
SNX25-204ENST00000506896 FAM133AQ8N9E0 248 aa23.01■■□□□ 1.27
SNX25-204ENST00000506896 PDRG1Q9NUG6 133 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms