RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 TCP10L2B9ZVM9 353 aa23.63■■□□□ 1.37
TTC39B-204ENST00000505732 RPN1P04843 607 aaKnown RBP23.63■■□□□ 1.37
TTC39B-204ENST00000505732 TECP42680 631 aa23.63■■□□□ 1.37
TTC39B-204ENST00000505732 JAG1P78504 1218 aa23.63■■□□□ 1.37
TTC39B-204ENST00000505732 UBE2SQ16763 222 aa23.63■■□□□ 1.37
TTC39B-204ENST00000505732 SPATA1Q5VX52 437 aa23.63■■□□□ 1.37
TTC39B-204ENST00000505732 CABP7Q86V35 215 aa23.63■■□□□ 1.37
TTC39B-204ENST00000505732 VSTM4Q8IW00 320 aa23.63■■□□□ 1.37
TTC39B-204ENST00000505732 CUL5Q93034 780 aa23.63■■□□□ 1.37
TTC39B-204ENST00000505732 TMOD2Q9NZR1 351 aa23.63■■□□□ 1.37
TTC39B-204ENST00000505732 F5H6K3 240 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 CLK2P49760 499 aaKnown RBP23.62■■□□□ 1.37
TTC39B-204ENST00000505732 MRPL12P52815 198 aaKnown RBP23.62■■□□□ 1.37
TTC39B-204ENST00000505732 KLRC3Q07444 240 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 RBM26Q5T8P6 1007 aaKnown RBP23.62■■□□□ 1.37
TTC39B-204ENST00000505732 ZBTB12Q9Y330 459 aaPredicted RBP23.62■■□□□ 1.37
TTC39B-204ENST00000505732 CLRN2A0PK11 232 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 GH2P01242 217 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 SFPQP23246 707 aaKnown RBP eCLIP23.62■■□□□ 1.37
TTC39B-204ENST00000505732 TNNI2P48788 182 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 RRP1BQ14684 758 aaKnown RBP23.62■■□□□ 1.37
TTC39B-204ENST00000505732 DLGAP5Q15398 846 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 QRICH1Q2TAL8 776 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 LRRC15Q8TF66 581 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 MTMR9Q96QG7 549 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 PSTPIP2Q9H939 334 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 RMND1Q9NWS8 449 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 HDAC9Q9UKV0 1011 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 SYNRGQ9UMZ2 1314 aa23.62■■□□□ 1.37
TTC39B-204ENST00000505732 TDP2O95551 362 aa23.61■■□□□ 1.37
TTC39B-204ENST00000505732 TPM2P07951 284 aa23.61■■□□□ 1.37
TTC39B-204ENST00000505732 DHX8Q14562 1220 aaKnown RBP23.61■■□□□ 1.37
TTC39B-204ENST00000505732 ZNF658Q5TYW1 1059 aaPredicted RBP23.61■■□□□ 1.37
TTC39B-204ENST00000505732 OGFOD1Q8N543 542 aa23.61■■□□□ 1.37
TTC39B-204ENST00000505732 KBTBD4Q9NVX7 518 aa23.61■■□□□ 1.37
TTC39B-204ENST00000505732 SLC37A4O43826 429 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 TXKP42681 527 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 CALCRLQ16602 461 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 PTPN21Q16825 1174 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 IGSF22Q8N9C0 903 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 GMCL1P1Q8NEA9 526 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.6■■□□□ 1.37
TTC39B-204ENST00000505732 ZNF70Q9UC06 446 aaPredicted RBP23.6■■□□□ 1.37
TTC39B-204ENST00000505732 COL2A1P02458 1487 aaPredicted RBP23.6■■□□□ 1.37
TTC39B-204ENST00000505732 COL4A5P29400 1685 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 PLCG1P19174 1290 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 CUEDC2Q9H467 287 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 CTNND2Q9UQB3 1225 aa23.6■■□□□ 1.37
TTC39B-204ENST00000505732 NDUFB10O96000 172 aa23.59■■□□□ 1.37
TTC39B-204ENST00000505732 MYL1P05976 194 aa23.59■■□□□ 1.37
TTC39B-204ENST00000505732 CDC37Q16543 378 aaPredicted RBP23.59■■□□□ 1.37
TTC39B-204ENST00000505732 VPS33BQ9H267 617 aa23.59■■□□□ 1.37
TTC39B-204ENST00000505732 HERC5Q9UII4 1024 aaKnown RBP23.59■■□□□ 1.37
TTC39B-204ENST00000505732 PCDHA1Q9Y5I3 950 aa23.59■■□□□ 1.37
TTC39B-204ENST00000505732 TPD52L1Q16890 204 aaPredicted RBP23.58■■□□□ 1.37
TTC39B-204ENST00000505732 FAM151AQ8WW52 585 aa23.58■■□□□ 1.37
TTC39B-204ENST00000505732 GMCL1Q96IK5 515 aa23.58■■□□□ 1.37
TTC39B-204ENST00000505732 NUP88Q99567 741 aaPredicted RBP23.58■■□□□ 1.37
TTC39B-204ENST00000505732 MMTAG2Q9BU76 263 aaKnown RBP23.58■■□□□ 1.37
TTC39B-204ENST00000505732 ZNRF3Q9ULT6 936 aa23.58■■□□□ 1.37
TTC39B-204ENST00000505732 CDKAL1Q5VV42 579 aa23.58■■□□□ 1.36
TTC39B-204ENST00000505732 PPP4R3AQ6IN85 833 aa23.58■■□□□ 1.36
TTC39B-204ENST00000505732 PRIMPOLQ96LW4 560 aa23.58■■□□□ 1.36
TTC39B-204ENST00000505732 C16orf45Q96MC5 204 aaPredicted RBP23.58■■□□□ 1.36
TTC39B-204ENST00000505732 GDAQ9Y2T3 454 aa23.58■■□□□ 1.36
TTC39B-204ENST00000505732 USP27XA6NNY8 438 aa23.57■■□□□ 1.36
TTC39B-204ENST00000505732 COBLO75128 1261 aa23.57■■□□□ 1.36
TTC39B-204ENST00000505732 FXR2P51116 673 aaKnown RBP eCLIP23.57■■□□□ 1.36
TTC39B-204ENST00000505732 NR1I3Q14994 352 aa23.57■■□□□ 1.36
TTC39B-204ENST00000505732 APTXQ7Z2E3 356 aaKnown RBP23.57■■□□□ 1.36
TTC39B-204ENST00000505732 MAGEF1Q9HAY2 307 aa23.57■■□□□ 1.36
TTC39B-204ENST00000505732 RWDD2AQ9UIY3 292 aa23.57■■□□□ 1.36
TTC39B-204ENST00000505732 ATF5Q9Y2D1 282 aaPredicted RBP23.57■■□□□ 1.36
TTC39B-204ENST00000505732 PSME4Q14997 1843 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 UQCRHLA0A096LP55 91 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 A0A1W2PRG0 241 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 KLRC4O43908 158 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 UQCRHP07919 91 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 KCNB1Q14721 858 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 SPDYE2Q495Y8 402 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 KMT5BQ4FZB7 885 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 NIM1KQ8IY84 436 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 GLT8D2Q9H1C3 349 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 LRWD1Q9UFC0 647 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 A0A1B0GTH6 734 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L15C9J2P7 530 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L13C9JLJ4 530 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L11C9JVI0 530 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L18D6R9N7 530 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L22D6RA61 530 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L17D6RBQ6 530 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L19D6RCP7 530 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L20D6RJB6 530 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 PRCPP42785 496 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L24Q0WX57 530 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 PAK1Q13153 545 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 TMEM266Q2M3C6 531 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 USP17L6PQ6QN14 398 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 PIM2Q9P1W9 311 aa23.56■■□□□ 1.36
TTC39B-204ENST00000505732 MAPK8IP1Q9UQF2 711 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms