RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 SPECC1LQ69YQ0 1117 aa17.4■□□□□ 0.38
SNCAIP-207ENST00000504884 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
SNCAIP-207ENST00000504884 CUL5Q93034 780 aa17.4■□□□□ 0.38
SNCAIP-207ENST00000504884 MTMR9Q96QG7 549 aa17.4■□□□□ 0.38
SNCAIP-207ENST00000504884 TMX1Q9H3N1 280 aa17.4■□□□□ 0.38
SNCAIP-207ENST00000504884 A0A1B0GTH6 734 aa17.39■□□□□ 0.38
SNCAIP-207ENST00000504884 FAM196BA6NMK8 535 aa17.39■□□□□ 0.38
SNCAIP-207ENST00000504884 PPP1R11O60927 126 aaPredicted RBP17.39■□□□□ 0.38
SNCAIP-207ENST00000504884 GTF2F1P35269 517 aaKnown RBP eCLIP17.39■□□□□ 0.38
SNCAIP-207ENST00000504884 TECP42680 631 aa17.39■□□□□ 0.38
SNCAIP-207ENST00000504884 CCDC93Q567U6 631 aa17.39■□□□□ 0.38
SNCAIP-207ENST00000504884 SLFN13Q68D06 897 aa17.39■□□□□ 0.38
SNCAIP-207ENST00000504884 IGSF22Q8N9C0 903 aa17.39■□□□□ 0.38
SNCAIP-207ENST00000504884 PRMT6Q96LA8 375 aaPredicted RBP17.39■□□□□ 0.38
SNCAIP-207ENST00000504884 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 PAK1Q13153 545 aa17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 SEPT2Q15019 361 aa17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 CALCRLQ16602 461 aa17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 ABCB5Q2M3G0 1257 aa17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 FILIP1LQ4L180 1135 aa17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 PSTPIP2Q9H939 334 aa17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 CTNND2Q9UQB3 1225 aa17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 MYH4Q9Y623 1939 aa17.39■□□□□ 0.37
SNCAIP-207ENST00000504884 USP27XA6NNY8 438 aa17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 PDIA5Q14554 519 aa17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 CEP135Q66GS9 1140 aa17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 PPP4R3AQ6IN85 833 aa17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 NYAP1Q6ZVC0 841 aa17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 SIAH1Q8IUQ4 282 aa17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 PSMD1Q99460 953 aa17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 RAB34Q9BZG1 259 aa17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 TRMT1Q9NXH9 659 aaKnown RBP17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 ZNF646O15015 1829 aaPredicted RBP17.38■□□□□ 0.37
SNCAIP-207ENST00000504884 LRRC10BA6NIK2 292 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 KIF2AO00139 706 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 CCP110O43303 1012 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 PLCG1P19174 1290 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 TXKP42681 527 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 AMPD3Q01432 767 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 ICA1Q05084 483 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 TMEM266Q2M3C6 531 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 RBM26Q5T8P6 1007 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 E4F1Q66K89 784 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 RSBN1LQ6PCB5 846 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 APTXQ7Z2E3 356 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 GMCL1P1Q8NEA9 526 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 CCDC47Q96A33 483 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 CALML4Q96GE6 196 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 PLIN2Q99541 437 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 GTPBP4Q9BZE4 634 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 COL2A1P02458 1487 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 SIPA1L1O43166 1804 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 F5H6K3 240 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 RHOBTB3O94955 611 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 KLRC3Q07444 240 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 SPAG1Q07617 926 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 KMT5BQ4FZB7 885 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 NELFBQ8WX92 580 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 NAP1L4Q99733 375 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 C7orf25Q9BPX7 421 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 VPS33BQ9H267 617 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 TMOD2Q9NZR1 351 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 ADD3Q9UEY8 706 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 HDAC9Q9UKV0 1011 aa17.37■□□□□ 0.37
SNCAIP-207ENST00000504884 H7C1D1 291 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 EDIL3O43854 480 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 KLRC4O43908 158 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 RAD21O60216 631 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 TUBB4AP04350 444 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 VIL1P09327 827 aaKnown RBP17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 PRCPP42785 496 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 TNNI2P48788 182 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 STIM1Q13586 685 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 ADSSL1Q8N142 457 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 LRWD1Q9UFC0 647 aa17.36■□□□□ 0.37
SNCAIP-207ENST00000504884 RIOK3O14730 519 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 TDP2O95551 362 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 GCFC2P16383 781 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 SF3B2Q13435 895 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 UBE2SQ16763 222 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 QRICH1Q2TAL8 776 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 ANKRD20A12PQ8NF67 263 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 GMCL1Q96IK5 515 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 MMTAG2Q9BU76 263 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 LIMA1Q9UHB6 759 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 HERC5Q9UII4 1024 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 SYNPO2Q9UMS6 1093 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 GDAQ9Y2T3 454 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 PCDHA1Q9Y5I3 950 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 SLC37A4O43826 429 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 GDF11O95390 407 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 BAG6P46379 1132 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 SHROOM1Q2M3G4 852 aaPredicted RBP17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 FCHSD1Q86WN1 690 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 LARGE2Q8N3Y3 721 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 OGFOD1Q8N543 542 aa17.35■□□□□ 0.37
SNCAIP-207ENST00000504884 GIMAP8Q8ND71 665 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms