RNA–Protein interactions for RNA: ENST00000503450.1

SCFD2-203, Transcript of sec1 family domain containing 2, humanhuman

TSL 4

Gene SCFD2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-203ENST00000503450 ACAD9Q9H845 621 aa6.12□□□□□ -1.43
SCFD2-203ENST00000503450 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.12□□□□□ -1.43
SCFD2-203ENST00000503450 COL20A1Q9P218 1284 aa6.12□□□□□ -1.43
SCFD2-203ENST00000503450 NRBP1Q9UHY1 535 aa6.12□□□□□ -1.43
SCFD2-203ENST00000503450 CTNNA3Q9UI47 895 aa6.12□□□□□ -1.43
SCFD2-203ENST00000503450 COLQQ9Y215 455 aaPredicted RBP6.12□□□□□ -1.43
SCFD2-203ENST00000503450 SYNRGQ9UMZ2 1314 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.11□□□□□ -1.43
SCFD2-203ENST00000503450 PALM3A6NDB9 673 aaPredicted RBP6.11□□□□□ -1.43
SCFD2-203ENST00000503450 POTEB2H3BUK9 544 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 DNM1LO00429 736 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 MSCO60682 206 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 CDC45O75419 566 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 PGK1P00558 417 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 ALAS1P13196 640 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 CAPN2P17655 700 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 EDNRBP24530 442 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 SLC4A3P48751 1232 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 TROAPQ12815 778 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 BAATQ14032 418 aaPredicted RBP6.11□□□□□ -1.43
SCFD2-203ENST00000503450 GRM4Q14833 912 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 LRRC41Q15345 812 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 CDC37Q16543 378 aaPredicted RBP6.11□□□□□ -1.43
SCFD2-203ENST00000503450 TKFCQ3LXA3 575 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 GJC2Q5T442 439 aaPredicted RBP6.11□□□□□ -1.43
SCFD2-203ENST00000503450 CREB3L3Q68CJ9 461 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 TAPT1Q6NXT6 567 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 ARMCX2Q7L311 632 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 CHST3Q7LGC8 479 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 CCDC144CPQ8IYA2 1237 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 ADGRF4Q8IZF3 695 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 MSL3Q8N5Y2 521 aaKnown RBP6.11□□□□□ -1.43
SCFD2-203ENST00000503450 KLHDC9Q8NEP7 349 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 IGDCC4Q8TDY8 1250 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 TBC1D5Q92609 795 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 TRERF1Q96PN7 1200 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 KRT23Q9C075 422 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 JMJD4Q9H9V9 463 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 LY9Q9HBG7 655 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 FBXO40Q9UH90 709 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 MAD2L2Q9UI95 211 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 CCPG1Q9ULG6 757 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 ISY1Q9ULR0 285 aaKnown RBP6.11□□□□□ -1.43
SCFD2-203ENST00000503450 ZMYND8Q9ULU4 1186 aaPredicted RBP6.11□□□□□ -1.43
SCFD2-203ENST00000503450 LTBP2Q14767 1821 aa6.11□□□□□ -1.43
SCFD2-203ENST00000503450 SH2B2O14492 632 aaPredicted RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 AKR1A1P14550 325 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 CNGA1P29973 690 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 ADCYAP1R1P41586 468 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 RPS6P62753 249 aaKnown RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 GHRHRQ02643 423 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 IKQ13123 557 aaPredicted RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 ACVR2BQ13705 512 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 QRICH1Q2TAL8 776 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 ASPRV1Q53RT3 343 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 HABP4Q5JVS0 413 aaKnown RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 GPATCH4Q5T3I0 446 aaKnown RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 IFIT1BQ5T764 474 aaKnown RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 CASC1Q6TDU7 716 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 CHRDL2Q6WN34 429 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 IQCA1Q86XH1 822 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 FBXO16Q8IX29 292 aaPredicted RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 C7orf61Q8IZ16 206 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 RASEFQ8IZ41 740 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 ANKRD35Q8N283 1001 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 DPF3Q92784 378 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 KCNB2Q92953 911 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 DDX11Q96FC9 970 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 GDF15Q99988 308 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 HTATIP2Q9BUP3 242 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 UPF3AQ9H1J1 476 aaKnown RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 KAT14Q9H8E8 782 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 CNNM2Q9H8M5 875 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 XPNPEP3Q9NQH7 507 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 PDGFCQ9NRA1 345 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 SLC5A4Q9NY91 659 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 RBM27Q9P2N5 1060 aaKnown RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 ZHX1Q9UKY1 873 aaPredicted RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 PHF24Q9UPV7 400 aa6.1□□□□□ -1.43
SCFD2-203ENST00000503450 GNEQ9Y223 722 aaKnown RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 BAZ2BQ9UIF8 2168 aaKnown RBP6.1□□□□□ -1.43
SCFD2-203ENST00000503450 GRIN2DO15399 1336 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 KLRF2D3W0D1 207 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 RBAK-RBAKDNI3L0D1 243 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 EVI5O60447 810 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 RARBP10826 455 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 SMPD1P17405 629 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 SYN1P17600 705 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 CST5P28325 142 aaPredicted RBP6.09□□□□□ -1.43
SCFD2-203ENST00000503450 FXR1P51114 621 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCFD2-203ENST00000503450 ALDH5A1P51649 535 aaPredicted RBP6.09□□□□□ -1.43
SCFD2-203ENST00000503450 ATN1P54259 1190 aaPredicted RBP6.09□□□□□ -1.43
SCFD2-203ENST00000503450 GJA9P57773 515 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 ADCK5Q3MIX3 580 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 CCDC144BQ3MJ40 725 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 USH1GQ495M9 461 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 TRIM60Q495X7 471 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 NSMFQ6X4W1 530 aa6.09□□□□□ -1.43
SCFD2-203ENST00000503450 SYTL5Q8TDW5 730 aaPredicted RBP6.09□□□□□ -1.43
SCFD2-203ENST00000503450 UBAC1Q9BSL1 405 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms