RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 FBXO40Q9UH90 709 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 NRBP1Q9UHY1 535 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 CCPG1Q9ULG6 757 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 TNKSO95271 1327 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
HSPG2-212ENST00000493940 POTEB2H3BUK9 544 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 CTAGE5O15320 804 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 TKFCQ3LXA3 575 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 CCDC144BQ3MJ40 725 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 CCSAPQ6IQ19 270 aaPredicted RBP14.81□□□□□ -0.04
HSPG2-212ENST00000493940 CHST3Q7LGC8 479 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 MSL3Q8N5Y2 521 aaKnown RBP14.81□□□□□ -0.04
HSPG2-212ENST00000493940 ARRDC4Q8NCT1 418 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 LRCH3Q96II8 777 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 PDGFCQ9NRA1 345 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 CTNNA3Q9UI47 895 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 RAD50Q92878 1312 aa14.81□□□□□ -0.04
HSPG2-212ENST00000493940 COL6A3P12111 3177 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 DLL1O00548 723 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 MAGEA10P43363 369 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-212ENST00000493940 ANTXR2P58335 489 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 RTP1P59025 263 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 BAATQ14032 418 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-212ENST00000493940 GPR153Q6NV75 609 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 NSMFQ6X4W1 530 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 SH3RF1Q7Z6J0 888 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 KLHDC9Q8NEP7 349 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 GPHNQ9NQX3 736 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-212ENST00000493940 ZHX1Q9UKY1 873 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-212ENST00000493940 PHF24Q9UPV7 400 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 SYNRGQ9UMZ2 1314 aa14.8□□□□□ -0.04
HSPG2-212ENST00000493940 E7EWF7 191 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 RARBP10826 455 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 AKR1A1P14550 325 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 SNX17Q15036 470 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 TRIM60Q495X7 471 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 TAPT1Q6NXT6 567 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 SLC30A10Q6XR72 485 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 EEPD1Q7L9B9 569 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 IQCA1Q86XH1 822 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 ADGRF4Q8IZF3 695 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 KRT23Q9C075 422 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 LSG1Q9H089 658 aaKnown RBP14.79□□□□□ -0.04
HSPG2-212ENST00000493940 ABHD16BQ9H3Z7 469 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 FAM184BQ9ULE4 1060 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 CNPY2Q9Y2B0 182 aa14.79□□□□□ -0.04
HSPG2-212ENST00000493940 KBTBD13C9JR72 458 aa14.78□□□□□ -0.04
HSPG2-212ENST00000493940 ITGB8P26012 769 aa14.78□□□□□ -0.04
HSPG2-212ENST00000493940 MDM2Q00987 491 aaPredicted RBP14.78□□□□□ -0.04
HSPG2-212ENST00000493940 KCNA10Q16322 511 aa14.78□□□□□ -0.04
HSPG2-212ENST00000493940 RUFY2Q8WXA3 655 aa14.78□□□□□ -0.04
HSPG2-212ENST00000493940 KAT14Q9H8E8 782 aa14.78□□□□□ -0.04
HSPG2-212ENST00000493940 JMJD4Q9H9V9 463 aa14.78□□□□□ -0.04
HSPG2-212ENST00000493940 ATP11BQ9Y2G3 1177 aa14.78□□□□□ -0.04
HSPG2-212ENST00000493940 RBM8AQ9Y5S9 174 aaKnown RBP14.78□□□□□ -0.04
HSPG2-212ENST00000493940 DOCK5Q9H7D0 1870 aa14.78□□□□□ -0.04
HSPG2-212ENST00000493940 DUSP11O75319 330 aaKnown RBP14.77□□□□□ -0.05
HSPG2-212ENST00000493940 USH1GQ495M9 461 aa14.77□□□□□ -0.05
HSPG2-212ENST00000493940 FBXO16Q8IX29 292 aaPredicted RBP14.77□□□□□ -0.05
HSPG2-212ENST00000493940 MORC4Q8TE76 937 aa14.77□□□□□ -0.05
HSPG2-212ENST00000493940 ESYT1Q9BSJ8 1104 aa14.77□□□□□ -0.05
HSPG2-212ENST00000493940 UPF3AQ9H1J1 476 aaKnown RBP14.77□□□□□ -0.05
HSPG2-212ENST00000493940 CNNM2Q9H8M5 875 aa14.77□□□□□ -0.05
HSPG2-212ENST00000493940 VAT1LQ9HCJ6 419 aa14.77□□□□□ -0.05
HSPG2-212ENST00000493940 MAD2L2Q9UI95 211 aa14.77□□□□□ -0.05
HSPG2-212ENST00000493940 GNEQ9Y223 722 aaKnown RBP14.77□□□□□ -0.05
HSPG2-212ENST00000493940 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
HSPG2-212ENST00000493940 A0A1W2PQ45 241 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 A0A1W2PQY0 241 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 TRIM43BA6NCK2 446 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 OPLAHO14841 1288 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 PPP1R11O60927 126 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 SMPD1P17405 629 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 ALDH5A1P51649 535 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 ACLYP53396 1101 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 GJA9P57773 515 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 RPS6P62753 249 aaKnown RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 BEX3Q00994 111 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 CDC37Q16543 378 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 QRICH1Q2TAL8 776 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 LRIT3Q3SXY7 679 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 GPATCH4Q5T3I0 446 aaKnown RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 IFIT1BQ5T764 474 aaKnown RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 CENPQQ7L2Z9 268 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 MB21D2Q8IYB1 491 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 IGDCC4Q8TDY8 1250 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 TRIM43Q96BQ3 446 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-212ENST00000493940 COL20A1Q9P218 1284 aa14.76□□□□□ -0.05
HSPG2-212ENST00000493940 WDR19Q8NEZ3 1342 aa14.75□□□□□ -0.05
HSPG2-212ENST00000493940 TRIP12Q14669 1992 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-212ENST00000493940 PTPDC1A2A3K4 754 aa14.75□□□□□ -0.05
HSPG2-212ENST00000493940 PALM3A6NDB9 673 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-212ENST00000493940 CALML3P27482 149 aa14.75□□□□□ -0.05
HSPG2-212ENST00000493940 TLE2Q04725 743 aa14.75□□□□□ -0.05
HSPG2-212ENST00000493940 CCDC178Q5BJE1 867 aa14.75□□□□□ -0.05
HSPG2-212ENST00000493940 RNF180Q86T96 592 aa14.75□□□□□ -0.05
HSPG2-212ENST00000493940 UBAC1Q9BSL1 405 aa14.75□□□□□ -0.05
HSPG2-212ENST00000493940 PDLIM7Q9NR12 457 aa14.75□□□□□ -0.05
HSPG2-212ENST00000493940 ASB14A6NK59 587 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms