RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 NPLOC4Q8TAT6 608 aa12.15□□□□□ -0.46
TRAPPC12-222ENST00000493792 NUP133Q8WUM0 1156 aa12.15□□□□□ -0.46
TRAPPC12-222ENST00000493792 CPVLQ9H3G5 476 aa12.15□□□□□ -0.46
TRAPPC12-222ENST00000493792 VAT1LQ9HCJ6 419 aa12.15□□□□□ -0.46
TRAPPC12-222ENST00000493792 FLRT1Q9NZU1 646 aa12.15□□□□□ -0.46
TRAPPC12-222ENST00000493792 FBXO40Q9UH90 709 aa12.15□□□□□ -0.46
TRAPPC12-222ENST00000493792 CCPG1Q9ULG6 757 aa12.15□□□□□ -0.46
TRAPPC12-222ENST00000493792 RIPK3Q9Y572 518 aa12.15□□□□□ -0.46
TRAPPC12-222ENST00000493792 CCDC69A6NI79 296 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 ATP2A1O14983 1001 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 COBLO75128 1261 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 SNHG28P0DPA3 235 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 BTNL9Q6UXG8 535 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 CATIPQ7Z7H3 387 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 ABRAQ8N0Z2 381 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 MYLIPQ8WY64 445 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 NEK1Q96PY6 1258 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 LRRC2Q9BYS8 371 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 SENP2Q9HC62 589 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 RNF146Q9NTX7 359 aa12.14□□□□□ -0.47
TRAPPC12-222ENST00000493792 TAL1P17542 331 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 CNGA1P29973 690 aa12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 CYP2C19P33261 490 aa12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 FGD1P98174 961 aa12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 KRT32Q14532 448 aa12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 TKFCQ3LXA3 575 aa12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 CHST13Q8NET6 341 aa12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 TMEM87BQ96K49 555 aa12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 RANBP17Q9H2T7 1088 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 ACAD9Q9H845 621 aa12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC12-222ENST00000493792 ZNF536O15090 1300 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 KLRF2D3W0D1 207 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 ICAM1P05362 532 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 COL9A1P20849 921 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 RTP1P59025 263 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 SMAD3P84022 425 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 CDC37Q16543 378 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 USH1GQ495M9 461 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 OLFML2BQ68BL8 750 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 NSMFQ6X4W1 530 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 ADGRF4Q8IZF3 695 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 TMTC2Q8N394 836 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 STAG2Q8N3U4 1231 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 TRPV1Q8NER1 839 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 CTCFLQ8NI51 663 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 IGDCC4Q8TDY8 1250 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 SYMPKQ92797 1274 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 TCEANC2Q96MN5 208 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 MYL10Q9BUA6 226 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 LY9Q9HBG7 655 aa12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 DDX20Q9UHI6 824 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 NAP1L2Q9ULW6 460 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC12-222ENST00000493792 ZNF236Q9UL36 1845 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 DNM1LO00429 736 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 MSCO60682 206 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 HSPA4P34932 840 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 GRM4Q14833 912 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 MUM1L1Q5H9M0 696 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 SLC39A5Q6ZMH5 540 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 SYNE3Q6ZMZ3 975 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 RAB11FIP4Q86YS3 637 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 ZNF654Q8IZM8 581 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 PIBF1Q8WXW3 757 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 BADQ92934 168 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 MAML3Q96JK9 1138 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 RAPGEFL1Q9UHV5 662 aa12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-222ENST00000493792 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 RXRAP19793 462 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 KIF5BP33176 963 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 CNTN2Q02246 1040 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 SNX17Q15036 470 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 BLOC1S2Q6QNY1 142 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 DHX32Q7L7V1 743 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 SH3RF1Q7Z6J0 888 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 CCDC144CPQ8IYA2 1237 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 USP38Q8NB14 1042 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 MTA3Q9BTC8 594 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 MAD2L2Q9UI95 211 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 PNMA2Q9UL42 364 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 SNX14Q9Y5W7 946 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 SLC12A7Q9Y666 1083 aa12.1□□□□□ -0.47
TRAPPC12-222ENST00000493792 PLXNA1Q9UIW2 1896 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 DDAH1O94760 285 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 HMGB1P09429 215 aaKnown RBP12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 CYBAP13498 195 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 CPA1P15085 419 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms