RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 TFCP2L1Q9NZI6 479 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 PCDHB5Q9Y5E4 795 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 SOS1Q07889 1333 aaPredicted RBP8.77□□□□□ -1.01
TPR-208ENST00000492973 PNPLA7Q6ZV29 1317 aa8.77□□□□□ -1.01
TPR-208ENST00000492973 ZNF831Q5JPB2 1677 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 GSC2O15499 205 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 IGLV1-40P01703 118 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 TFE3P19532 575 aaPredicted RBP8.76□□□□□ -1.01
TPR-208ENST00000492973 EIF2S2P20042 333 aaKnown RBP8.76□□□□□ -1.01
TPR-208ENST00000492973 RAB6AP20340 208 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 CANXP27824 592 aaKnown RBP8.76□□□□□ -1.01
TPR-208ENST00000492973 EIF5P55010 431 aaKnown RBP8.76□□□□□ -1.01
TPR-208ENST00000492973 RING1Q06587 406 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 NFIAQ12857 509 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 PROSER3Q2NL68 480 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 COL23A1Q86Y22 540 aaPredicted RBP8.76□□□□□ -1.01
TPR-208ENST00000492973 RSRP1Q9BUV0 290 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 TLR6Q9Y2C9 796 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 TJP1Q07157 1748 aa8.76□□□□□ -1.01
TPR-208ENST00000492973 CICQ96RK0 1608 aaPredicted RBP8.76□□□□□ -1.01
TPR-208ENST00000492973 C5P01031 1676 aa8.75□□□□□ -1.01
TPR-208ENST00000492973 SRCAPQ6ZRS2 3230 aa8.75□□□□□ -1.01
TPR-208ENST00000492973 VAMP4O75379 141 aa8.75□□□□□ -1.01
TPR-208ENST00000492973 NFICP08651 508 aa8.75□□□□□ -1.01
TPR-208ENST00000492973 VAMP1P23763 118 aa8.75□□□□□ -1.01
TPR-208ENST00000492973 ERMP1Q7Z2K6 904 aa8.75□□□□□ -1.01
TPR-208ENST00000492973 LRP10Q7Z4F1 713 aa8.75□□□□□ -1.01
TPR-208ENST00000492973 PCDHA4Q9UN74 947 aa8.75□□□□□ -1.01
TPR-208ENST00000492973 C4BP0C0L5 1744 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 ANXA1P04083 346 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 NTF4P34130 210 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 IL6STP40189 918 aaPredicted RBP8.74□□□□□ -1.01
TPR-208ENST00000492973 SEPT6Q14141 434 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 MAP7Q14244 749 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 TTLL4Q14679 1199 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 TWISTNBQ3B726 338 aaPredicted RBP8.74□□□□□ -1.01
TPR-208ENST00000492973 PAOXQ6QHF9 649 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 SEZ6L2Q6UXD5 910 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.74□□□□□ -1.01
TPR-208ENST00000492973 RNF214Q8ND24 703 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 FLAD1Q8NFF5 587 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 RHOVQ96L33 236 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 DBNDD2Q9BQY9 259 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 BACH2Q9BYV9 841 aa8.74□□□□□ -1.01
TPR-208ENST00000492973 SUPT16HQ9Y5B9 1047 aaKnown RBP8.74□□□□□ -1.01
TPR-208ENST00000492973 VIRMAQ69YN4 1812 aaKnown RBP8.74□□□□□ -1.01
TPR-208ENST00000492973 DCDC2CA8MYV0 355 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 TCERG1O14776 1098 aaKnown RBP8.73□□□□□ -1.01
TPR-208ENST00000492973 INPP5AQ14642 412 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 NFKBIBQ15653 356 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 LRFN4Q6PJG9 635 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 TMEM74Q96NL1 305 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 MIR1-1HGQ9H1L0 117 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 PIDD1Q9HB75 910 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 DDX21Q9NR30 783 aaKnown RBP eCLIP8.73□□□□□ -1.01
TPR-208ENST00000492973 CHPF2Q9P2E5 772 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 PRKAG2Q9UGJ0 569 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 SRP68Q9UHB9 627 aaKnown RBP8.73□□□□□ -1.01
TPR-208ENST00000492973 COL15A1P39059 1388 aa8.73□□□□□ -1.01
TPR-208ENST00000492973 F6X3S4 739 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 DYNC1LI2O43237 492 aaPredicted RBP8.72□□□□□ -1.01
TPR-208ENST00000492973 ZBTB7AO95365 584 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 HCLS1P14317 486 aaPredicted RBP8.72□□□□□ -1.01
TPR-208ENST00000492973 MYL6BP14649 208 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 LMNB1P20700 586 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 PPM1JQ5JR12 505 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 TTLL7Q6ZT98 887 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 C12orf40Q86WS4 652 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 SMYD4Q8IYR2 804 aaPredicted RBP8.72□□□□□ -1.01
TPR-208ENST00000492973 GATA6Q92908 595 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 NARFQ9UHQ1 456 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 RCAN3Q9UKA8 241 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 DAGLAQ9Y4D2 1042 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 CSADQ9Y600 493 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 RNF123Q5XPI4 1314 aa8.72□□□□□ -1.01
TPR-208ENST00000492973 USP42Q9H9J4 1324 aaKnown RBP8.72□□□□□ -1.01
TPR-208ENST00000492973 MYH14Q7Z406 1995 aaKnown RBP8.72□□□□□ -1.01
TPR-208ENST00000492973 COL5A3P25940 1745 aaPredicted RBP8.71□□□□□ -1.01
TPR-208ENST00000492973 TAF1LQ8IZX4 1826 aa8.71□□□□□ -1.01
TPR-208ENST00000492973 A0A087WZG4 1122 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 UNCXA6NJT0 531 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 CAMTA2O94983 1202 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 RECKO95980 971 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 GYS1P13807 737 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 RFC4P35249 363 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 CDK8P49336 464 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 LMNB2Q03252 620 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 PWP1Q13610 501 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 CCDC30Q5VVM6 783 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 CYFIP1Q7L576 1253 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 CCDC84Q86UT8 332 aaPredicted RBP8.71□□□□□ -1.02
TPR-208ENST00000492973 ZDHHC13Q8IUH4 622 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 RELL1Q8IUW5 271 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 TMEM87AQ8NBN3 555 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 XAGE3Q8WTP9 111 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 ISL2Q96A47 359 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 PLPPR2Q96GM1 343 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 COPRSQ9NQ92 184 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 C1GALT1Q9NS00 363 aa8.71□□□□□ -1.02
TPR-208ENST00000492973 PODXL2Q9NZ53 605 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms