RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 MUC3AQ02505 3323 aa13.83□□□□□ -0.2
MDC1-207ENST00000492462 LRRC37A2A6NM11 1700 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 NFIBO00712 420 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 ADCYAP1R1P41586 468 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
MDC1-207ENST00000492462 SEC23AQ15436 765 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 NSMFQ6X4W1 530 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 CENPQQ7L2Z9 268 aaPredicted RBP13.82□□□□□ -0.2
MDC1-207ENST00000492462 CCDC144CPQ8IYA2 1237 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 MSL3Q8N5Y2 521 aaKnown RBP13.82□□□□□ -0.2
MDC1-207ENST00000492462 FERMT2Q96AC1 680 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 KATNBL1Q9H079 304 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 KAT14Q9H8E8 782 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 CNNM2Q9H8M5 875 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 SENP2Q9HC62 589 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 XPNPEP3Q9NQH7 507 aa13.82□□□□□ -0.2
MDC1-207ENST00000492462 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
MDC1-207ENST00000492462 RARBP10826 455 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 AKR1A1P14550 325 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 PTGS1P23219 599 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 PLA2G5P39877 138 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 ACVR2BQ13705 512 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 COL9A3Q14050 684 aaPredicted RBP13.81□□□□□ -0.2
MDC1-207ENST00000492462 CCDC178Q5BJE1 867 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 CLEC4DQ8WXI8 215 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 MAP4K1Q92918 833 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 UBAC1Q9BSL1 405 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 MTMR10Q9NXD2 777 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 CYP39A1Q9NYL5 469 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 RAPGEFL1Q9UHV5 662 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 RBM8AQ9Y5S9 174 aaKnown RBP13.81□□□□□ -0.2
MDC1-207ENST00000492462 MYH6P13533 1939 aa13.81□□□□□ -0.2
MDC1-207ENST00000492462 BAZ2BQ9UIF8 2168 aaKnown RBP13.81□□□□□ -0.2
MDC1-207ENST00000492462 EYSQ5T1H1 3165 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 MYADML2A6NDP7 307 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 KBTBD13C9JR72 458 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 E7EWF7 191 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 ADAMTS4O75173 837 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 NT5C2P49902 561 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 BAATQ14032 418 aaPredicted RBP13.8□□□□□ -0.2
MDC1-207ENST00000492462 CCDC144BQ3MJ40 725 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
MDC1-207ENST00000492462 SLC30A10Q6XR72 485 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 CHST3Q7LGC8 479 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 STAG2Q8N3U4 1231 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 ESYT1Q9BSJ8 1104 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 LSG1Q9H089 658 aaKnown RBP13.8□□□□□ -0.2
MDC1-207ENST00000492462 FAM184BQ9ULE4 1060 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 SYNRGQ9UMZ2 1314 aa13.8□□□□□ -0.2
MDC1-207ENST00000492462 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.79□□□□□ -0.2
MDC1-207ENST00000492462 ANTXR2P58335 489 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 RTP1P59025 263 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 USH1GQ495M9 461 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 TMEM63BQ5T3F8 832 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 IFIT1BQ5T764 474 aaKnown RBP13.79□□□□□ -0.2
MDC1-207ENST00000492462 EEPD1Q7L9B9 569 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 ADGRF4Q8IZF3 695 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 GDF15Q99988 308 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 ABHD16BQ9H3Z7 469 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 VAT1LQ9HCJ6 419 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 GPHNQ9NQX3 736 aaPredicted RBP13.79□□□□□ -0.2
MDC1-207ENST00000492462 PHF24Q9UPV7 400 aa13.79□□□□□ -0.2
MDC1-207ENST00000492462 PTPDC1A2A3K4 754 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 IFIT3O14879 490 aaKnown RBP13.78□□□□□ -0.2
MDC1-207ENST00000492462 PARP1P09874 1014 aaKnown RBP13.78□□□□□ -0.2
MDC1-207ENST00000492462 MAGEA10P43363 369 aaPredicted RBP13.78□□□□□ -0.2
MDC1-207ENST00000492462 TRDNQ13061 729 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 CDC37Q16543 378 aaPredicted RBP13.78□□□□□ -0.2
MDC1-207ENST00000492462 SLC35G1Q2M3R5 365 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 ASPRV1Q53RT3 343 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 SLC39A5Q6ZMH5 540 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 TBC1D5Q92609 795 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 FAM122AQ96E09 287 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 PDGFCQ9NRA1 345 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 ATP11BQ9Y2G3 1177 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
MDC1-207ENST00000492462 ASB14A6NK59 587 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 CTAGE5O15320 804 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 DUSP11O75319 330 aaKnown RBP13.77□□□□□ -0.21
MDC1-207ENST00000492462 CALML3P27482 149 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
MDC1-207ENST00000492462 SNX17Q15036 470 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 TRIM60Q495X7 471 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 CCSAPQ6IQ19 270 aaPredicted RBP13.77□□□□□ -0.21
MDC1-207ENST00000492462 RNF207Q6ZRF8 634 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 RALYLQ86SE5 291 aaKnown RBP13.77□□□□□ -0.21
MDC1-207ENST00000492462 RNF180Q86T96 592 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 FBXO16Q8IX29 292 aaPredicted RBP13.77□□□□□ -0.21
MDC1-207ENST00000492462 MB21D2Q8IYB1 491 aaPredicted RBP13.77□□□□□ -0.21
MDC1-207ENST00000492462 KLHDC9Q8NEP7 349 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 NCOA7Q8NI08 942 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.21
MDC1-207ENST00000492462 A0A1W2PQ45 241 aaPredicted RBP13.76□□□□□ -0.21
MDC1-207ENST00000492462 A0A1W2PQY0 241 aa13.76□□□□□ -0.21
MDC1-207ENST00000492462 SLC27A2O14975 620 aa13.76□□□□□ -0.21
MDC1-207ENST00000492462 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
MDC1-207ENST00000492462 ALDH5A1P51649 535 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms