RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 TAF6LQ9Y6J9 622 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 LRRC37A2A6NM11 1700 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 LTBP2Q14767 1821 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 NFIBO00712 420 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 CTAGE5O15320 804 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 GOLGA8HP0CJ92 632 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 PTGS1P23219 599 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 IMMTQ16891 758 aaKnown RBP14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 CCDC144BQ3MJ40 725 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 TRIM60Q495X7 471 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 C1orf53Q5VUE5 145 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 CLEC4DQ8WXI8 215 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 ZSCAN10Q96SZ4 725 aaPredicted RBP14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 ABHD16BQ9H3Z7 469 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 FAM184BQ9ULE4 1060 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 ATP11BQ9Y2G3 1177 aa14.9□□□□□ -0.02
SEC61A1-206ENST00000491668 A0A1W2PQ45 241 aaPredicted RBP14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 A0A1W2PQY0 241 aa14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 DUSP11O75319 330 aaKnown RBP14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 MDM2Q00987 491 aaPredicted RBP14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 TMEM63BQ5T3F8 832 aa14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 CASC1Q6TDU7 716 aa14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 SH3RF1Q7Z6J0 888 aa14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 RNF180Q86T96 592 aa14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 LRCH3Q96II8 777 aa14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 CTNNA3Q9UI47 895 aa14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 RAD50Q92878 1312 aa14.89□□□□□ -0.03
SEC61A1-206ENST00000491668 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 ACLYP53396 1101 aa14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 TLE2Q04725 743 aa14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 BAATQ14032 418 aaPredicted RBP14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 NSMFQ6X4W1 530 aa14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 CYB5R4Q7L1T6 521 aa14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 PNMA1Q8ND90 353 aa14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 MORC4Q8TE76 937 aa14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 UBA5Q9GZZ9 404 aa14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 UPF3AQ9H1J1 476 aaKnown RBP14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 COL6A3P12111 3177 aa14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 TNKSO95271 1327 aa14.88□□□□□ -0.03
SEC61A1-206ENST00000491668 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 SGSM2O43147 1006 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 CYP21A2P08686 494 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 ITGB8P26012 769 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 CST5P28325 142 aaPredicted RBP14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 NT5C2P49902 561 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 NKX3-2P78367 333 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 SEC23AQ15436 765 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 KCNA10Q16322 511 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 TAPT1Q6NXT6 567 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 SLC30A10Q6XR72 485 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 IQCA1Q86XH1 822 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 RUFY2Q8WXA3 655 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 TSEN34Q9BSV6 310 aaKnown RBP14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 UBE2OQ9C0C9 1292 aaKnown RBP14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 PDLIM7Q9NR12 457 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 PDGFCQ9NRA1 345 aa14.87□□□□□ -0.03
SEC61A1-206ENST00000491668 ASB14A6NK59 587 aa14.86□□□□□ -0.03
SEC61A1-206ENST00000491668 GJA9P57773 515 aa14.86□□□□□ -0.03
SEC61A1-206ENST00000491668 GPATCH4Q5T3I0 446 aaKnown RBP14.86□□□□□ -0.03
SEC61A1-206ENST00000491668 STOX1Q6ZVD7 989 aa14.86□□□□□ -0.03
SEC61A1-206ENST00000491668 TDHQ8IZJ6 230 aa14.86□□□□□ -0.03
SEC61A1-206ENST00000491668 KRT23Q9C075 422 aa14.86□□□□□ -0.03
SEC61A1-206ENST00000491668 SENP2Q9HC62 589 aa14.86□□□□□ -0.03
SEC61A1-206ENST00000491668 GNEQ9Y223 722 aaKnown RBP14.86□□□□□ -0.03
SEC61A1-206ENST00000491668 WDR19Q8NEZ3 1342 aa14.86□□□□□ -0.03
SEC61A1-206ENST00000491668 CDC45O75419 566 aa14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 SMPD1P17405 629 aa14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 SLC35G1Q2M3R5 365 aa14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 CCDC178Q5BJE1 867 aa14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 EEPD1Q7L9B9 569 aa14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 FBXO16Q8IX29 292 aaPredicted RBP14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 ADGRF4Q8IZF3 695 aa14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 STAG2Q8N3U4 1231 aa14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 KAT14Q9H8E8 782 aa14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 CNNM2Q9H8M5 875 aa14.85□□□□□ -0.03
SEC61A1-206ENST00000491668 MOXD2PA6NHM9 499 aa14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 C6orf222P0C671 652 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 ALDH5A1P51649 535 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 RPS6P62753 249 aaKnown RBP14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 BEX3Q00994 111 aa14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 TNFAIP2Q03169 654 aa14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 COL9A3Q14050 684 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 LRIT3Q3SXY7 679 aa14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 ANKRD33Q7Z3H0 272 aa14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 TBC1D5Q92609 795 aa14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 MAP4K1Q92918 833 aa14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 UBAC1Q9BSL1 405 aa14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 PRDM5Q9NQX1 630 aaPredicted RBP14.84□□□□□ -0.03
SEC61A1-206ENST00000491668 PTPDC1A2A3K4 754 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 ASGR1P07306 291 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 CALML3P27482 149 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 CDK7P50613 346 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 FAAP100Q0VG06 881 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 CDC37Q16543 378 aaPredicted RBP14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 USH1GQ495M9 461 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 ASPRV1Q53RT3 343 aa14.83□□□□□ -0.04
SEC61A1-206ENST00000491668 GNASQ5JWF2 1037 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms