RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 RGS22Q8NE09 1264 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 IGDCC4Q8TDY8 1250 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 MORC4Q8TE76 937 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 CPVLQ9H3G5 476 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
COL27A1-206ENST00000490831 ERICH2A1L162 156 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 PALM3A6NDB9 673 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-206ENST00000490831 CDC45O75419 566 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 SART3Q15020 963 aaKnown RBP17.76■□□□□ 0.43
COL27A1-206ENST00000490831 CDC37Q16543 378 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-206ENST00000490831 LRRC26Q2I0M4 334 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 GJC2Q5T442 439 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-206ENST00000490831 CREB3L3Q68CJ9 461 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 STAG2Q8N3U4 1231 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 MTMR8Q96EF0 704 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 JMJD4Q9H9V9 463 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 SENP2Q9HC62 589 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 ANO2Q9NQ90 1003 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 XPNPEP3Q9NQH7 507 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 MAD2L2Q9UI95 211 aa17.76■□□□□ 0.43
COL27A1-206ENST00000490831 DNAH12Q6ZR08 3092 aa17.75■□□□□ 0.43
COL27A1-206ENST00000490831 KBTBD13C9JR72 458 aa17.75■□□□□ 0.43
COL27A1-206ENST00000490831 ADAMTS4O75173 837 aa17.75■□□□□ 0.43
COL27A1-206ENST00000490831 DUSP11O75319 330 aaKnown RBP17.75■□□□□ 0.43
COL27A1-206ENST00000490831 TROAPQ12815 778 aa17.75■□□□□ 0.43
COL27A1-206ENST00000490831 BAATQ14032 418 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-206ENST00000490831 GRM4Q14833 912 aa17.75■□□□□ 0.43
COL27A1-206ENST00000490831 WTAPQ15007 396 aa17.75■□□□□ 0.43
COL27A1-206ENST00000490831 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
COL27A1-206ENST00000490831 CASC1Q6TDU7 716 aa17.75■□□□□ 0.43
COL27A1-206ENST00000490831 SENP6Q9GZR1 1112 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-206ENST00000490831 PRO3102Q9H379 93 aa17.75■□□□□ 0.43
COL27A1-206ENST00000490831 ZHX1Q9UKY1 873 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-206ENST00000490831 KLRF2D3W0D1 207 aa17.74■□□□□ 0.43
COL27A1-206ENST00000490831 NKX3-2P78367 333 aa17.74■□□□□ 0.43
COL27A1-206ENST00000490831 QRICH1Q2TAL8 776 aa17.74■□□□□ 0.43
COL27A1-206ENST00000490831 CCDC144BQ3MJ40 725 aa17.74■□□□□ 0.43
COL27A1-206ENST00000490831 TMEM67Q5HYA8 995 aa17.74■□□□□ 0.43
COL27A1-206ENST00000490831 CHST3Q7LGC8 479 aa17.74■□□□□ 0.43
COL27A1-206ENST00000490831 RNF180Q86T96 592 aa17.74■□□□□ 0.43
COL27A1-206ENST00000490831 ADD3Q9UEY8 706 aaKnown RBP17.74■□□□□ 0.43
COL27A1-206ENST00000490831 PHF24Q9UPV7 400 aa17.74■□□□□ 0.43
COL27A1-206ENST00000490831 LRRC37A2A6NM11 1700 aa17.74■□□□□ 0.43
COL27A1-206ENST00000490831 ABCB11O95342 1321 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 RANBP2P49792 3224 aaKnown RBP17.73■□□□□ 0.43
COL27A1-206ENST00000490831 ADCY6O43306 1168 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 PGK1P00558 417 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 CST5P28325 142 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-206ENST00000490831 RPS6P62753 249 aaKnown RBP17.73■□□□□ 0.43
COL27A1-206ENST00000490831 SNX17Q15036 470 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 C1orf53Q5VUE5 145 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 CCSAPQ6IQ19 270 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-206ENST00000490831 SLC30A10Q6XR72 485 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 RNF207Q6ZRF8 634 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 C7orf61Q8IZ16 206 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 KLHDC9Q8NEP7 349 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 LENG1Q96BZ8 264 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-206ENST00000490831 PURBQ96QR8 312 aaKnown RBP17.73■□□□□ 0.43
COL27A1-206ENST00000490831 MAP3K14Q99558 947 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 TSEN34Q9BSV6 310 aaKnown RBP17.73■□□□□ 0.43
COL27A1-206ENST00000490831 UPF3AQ9H1J1 476 aaKnown RBP17.73■□□□□ 0.43
COL27A1-206ENST00000490831 RIOX1Q9H6W3 641 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 LY9Q9HBG7 655 aa17.73■□□□□ 0.43
COL27A1-206ENST00000490831 COLQQ9Y215 455 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-206ENST00000490831 SYNRGQ9UMZ2 1314 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 PTPDC1A2A3K4 754 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 PRC1O43663 620 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 MCM5P33992 734 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 ALDH5A1P51649 535 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-206ENST00000490831 COL9A3Q14050 684 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-206ENST00000490831 SLC35G1Q2M3R5 365 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 TSGA10IPQ3SY00 556 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 USH1GQ495M9 461 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 HABP4Q5JVS0 413 aaKnown RBP17.72■□□□□ 0.43
COL27A1-206ENST00000490831 FBXO11Q86XK2 927 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 DNERQ8NFT8 737 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
COL27A1-206ENST00000490831 SH2B2O14492 632 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-206ENST00000490831 ZBTB5O15062 677 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 EDNRBP24530 442 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 ADCYAP1R1P41586 468 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 LIFRP42702 1097 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 GJA9P57773 515 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 GHRHRQ02643 423 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 RNF20Q5VTR2 975 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 TAPT1Q6NXT6 567 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 SLC39A5Q6ZMH5 540 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 CATIPQ7Z7H3 387 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 VTA1Q9NP79 307 aa17.71■□□□□ 0.43
COL27A1-206ENST00000490831 MRPL11Q9Y3B7 192 aaKnown RBP17.71■□□□□ 0.43
COL27A1-206ENST00000490831 DHX16O60231 1041 aaKnown RBP17.7■□□□□ 0.42
COL27A1-206ENST00000490831 DDAH1O94760 285 aa17.7■□□□□ 0.42
COL27A1-206ENST00000490831 CALML3P27482 149 aa17.7■□□□□ 0.42
COL27A1-206ENST00000490831 IQSEC1Q6DN90 963 aa17.7■□□□□ 0.42
COL27A1-206ENST00000490831 CHRDL2Q6WN34 429 aa17.7■□□□□ 0.42
COL27A1-206ENST00000490831 AMNQ9BXJ7 453 aa17.7■□□□□ 0.42
COL27A1-206ENST00000490831 VAT1LQ9HCJ6 419 aa17.7■□□□□ 0.42
COL27A1-206ENST00000490831 GPHNQ9NQX3 736 aaPredicted RBP17.7■□□□□ 0.42
COL27A1-206ENST00000490831 PPP4R2Q9NY27 417 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms