RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 PKN1Q16512 942 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 FAM196AQ6ZSG2 479 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.87■□□□□ 0.13
RER1-207ENST00000488353 GSPT2Q8IYD1 628 aaKnown RBP15.87■□□□□ 0.13
RER1-207ENST00000488353 ENAHQ8N8S7 591 aaPredicted RBP15.87■□□□□ 0.13
RER1-207ENST00000488353 ZNF384Q8TF68 577 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 SYMPKQ92797 1274 aaKnown RBP15.87■□□□□ 0.13
RER1-207ENST00000488353 JAKMIP2Q96AA8 810 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 CAPZA3Q96KX2 299 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 JPH2Q9BR39 696 aaPredicted RBP15.87■□□□□ 0.13
RER1-207ENST00000488353 REXO2Q9Y3B8 237 aaKnown RBP15.87■□□□□ 0.13
RER1-207ENST00000488353 A0A1B0GUL6 1792 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 NHSQ6T4R5 1651 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 PPP1R3GB7ZBB8 358 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 SPAG1Q07617 926 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 KRT31Q15323 416 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 CAGE1Q8TC20 777 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 CHP1Q99653 195 aa15.87■□□□□ 0.13
RER1-207ENST00000488353 NDUFAB1O14561 156 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 CDC25AP30304 524 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 KRT2P35908 639 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 FNTAP49354 379 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 SKOR1P84550 965 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 CCDC122Q5T0U0 273 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 TXNRD3Q86VQ6 643 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 PAGE5Q96GU1 130 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 RNF26Q9BY78 433 aaPredicted RBP15.86■□□□□ 0.13
RER1-207ENST00000488353 RABEP2Q9H5N1 569 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 SAMM50Q9Y512 469 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 MEFVO15553 781 aaPredicted RBP15.86■□□□□ 0.13
RER1-207ENST00000488353 EPB41P11171 864 aaKnown RBP15.86■□□□□ 0.13
RER1-207ENST00000488353 EVX2Q03828 476 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 IFIT1BQ5T764 474 aaKnown RBP15.86■□□□□ 0.13
RER1-207ENST00000488353 ZNF662Q6ZS27 426 aa15.86■□□□□ 0.13
RER1-207ENST00000488353 ZSCAN10Q96SZ4 725 aaPredicted RBP15.86■□□□□ 0.13
RER1-207ENST00000488353 XBP1P17861 261 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 TRAPPC3LQ5T215 181 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 SH3RF1Q7Z6J0 888 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 SEPT12Q8IYM1 358 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 GIMAP7Q8NHV1 300 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 RUBCNQ92622 972 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 RIOK1Q9BRS2 568 aaKnown RBP15.85■□□□□ 0.13
RER1-207ENST00000488353 PHF20Q9BVI0 1012 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 VPS16Q9H269 839 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 AATFQ9NY61 560 aaKnown RBP eCLIP15.85■□□□□ 0.13
RER1-207ENST00000488353 KRT86O43790 486 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 C21orf2O43822 256 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 TM4SF1P30408 202 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 RDXP35241 583 aaKnown RBP15.85■□□□□ 0.13
RER1-207ENST00000488353 COPB1P53618 953 aaKnown RBP15.85■□□□□ 0.13
RER1-207ENST00000488353 KRT83P78385 493 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 MICALCLQ6ZW33 695 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 FBXO33Q7Z6M2 555 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 OR8K1Q8NGG5 319 aa15.85■□□□□ 0.13
RER1-207ENST00000488353 ANO9A1A5B4 782 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 CHUKO15111 745 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
RER1-207ENST00000488353 SND1Q7KZF4 910 aaKnown RBP eCLIP15.84■□□□□ 0.135e-7■■■□□ 15.9
RER1-207ENST00000488353 YTHDF3Q7Z739 585 aaKnown RBP15.84■□□□□ 0.13
RER1-207ENST00000488353 CATIPQ7Z7H3 387 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 BLZF1Q9H2G9 400 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 MYO1FO00160 1098 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 DPYDQ12882 1025 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 NEDD9Q14511 834 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 NFIXQ14938 502 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 TSR1Q2NL82 804 aaKnown RBP15.84■□□□□ 0.13
RER1-207ENST00000488353 ALS2CLQ60I27 953 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 RUFY1Q96T51 708 aa15.84■□□□□ 0.13
RER1-207ENST00000488353 CACNA1SQ13698 1873 aa15.83■□□□□ 0.13
RER1-207ENST00000488353 COL24A1Q17RW2 1714 aa15.83■□□□□ 0.13
RER1-207ENST00000488353 RGL2O15211 777 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 NMT2O60551 498 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 PRDX5P30044 214 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 HIBADHP31937 336 aaKnown RBP15.83■□□□□ 0.12
RER1-207ENST00000488353 FUT2Q10981 343 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 TTC19Q6DKK2 380 aaPredicted RBP15.83■□□□□ 0.12
RER1-207ENST00000488353 CTNND2Q9UQB3 1225 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 PRPF3O43395 683 aaKnown RBP15.83■□□□□ 0.12
RER1-207ENST00000488353 ZEB2O60315 1214 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 HERVK_113P62684 666 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 MECOMQ03112 1051 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 PTGDRQ13258 359 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 MTA3Q9BTC8 594 aa15.83■□□□□ 0.12
RER1-207ENST00000488353 LUC7L2Q9Y383 392 aaKnown RBP15.83■□□□□ 0.12
RER1-207ENST00000488353 TAF1LQ8IZX4 1826 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 TNRC6CQ9HCJ0 1690 aaKnown RBP15.82■□□□□ 0.12
RER1-207ENST00000488353 PDE2AO00408 941 aaPredicted RBP15.82■□□□□ 0.12
RER1-207ENST00000488353 TCP11X2Q5H9J9 407 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 KIAA1328Q86T90 577 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 MMGT1Q8N4V1 131 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 PAGR1Q9BTK6 254 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 TAB2Q9NYJ8 693 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 ANAPC4Q9UJX5 808 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.82■□□□□ 0.12
RER1-207ENST00000488353 RCAN1P53805 252 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 UBXN1Q04323 297 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 SLC4A8Q2Y0W8 1093 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 FAM47AQ5JRC9 791 aa15.82■□□□□ 0.12
RER1-207ENST00000488353 TTC38Q5R3I4 469 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms