RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 SWAP70Q9UH65 585 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 MAD2L2Q9UI95 211 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 PCDHA7Q9UN72 937 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 STX8Q9UNK0 236 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 IGKV6D-41A0A0C4DH26 115 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 A0A1W2PQ27 194 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 A0A1W2PQ64 194 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 A0A1W2PQD8 194 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 hCG_1642624A0A1W2PR95 340 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 SCG2P13521 617 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 AKR1B1P15121 316 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 POLD1P28340 1107 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 SHMT1P34896 483 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 KRT2P35908 639 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 GNAQP50148 359 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 RBM5P52756 815 aaKnown RBP eCLIP8.3□□□□□ -1.08
TMC1-204ENST00000486417 TGFB2P61812 414 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 NR5A1Q13285 461 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 SLC39A14Q15043 492 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 SF3A1Q15459 793 aaKnown RBP8.3□□□□□ -1.08
TMC1-204ENST00000486417 MAP3K11Q16584 847 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 PFKFB3Q16875 520 aaPredicted RBP8.3□□□□□ -1.08
TMC1-204ENST00000486417 SOGA3Q5TF21 947 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 ADALQ6DHV7 355 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 CCDC73Q6ZRK6 1079 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 RBM43Q6ZSC3 357 aaKnown RBP8.3□□□□□ -1.08
TMC1-204ENST00000486417 STAG2Q8N3U4 1231 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 FSIP1Q8NA03 581 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 MRPS27Q92552 414 aaKnown RBP8.3□□□□□ -1.08
TMC1-204ENST00000486417 CEP95Q96GE4 821 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 IDI2Q9BXS1 227 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 EHD4Q9H223 541 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 VPS33BQ9H267 617 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 VRTNQ9H8Y1 702 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 ZNF277Q9NRM2 450 aaPredicted RBP8.3□□□□□ -1.08
TMC1-204ENST00000486417 SERPINB13Q9UIV8 391 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 FCF1Q9Y324 198 aaKnown RBP8.3□□□□□ -1.08
TMC1-204ENST00000486417 GPSM3Q9Y4H4 160 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 V9GY48 417 aaPredicted RBP8.3□□□□□ -1.08
TMC1-204ENST00000486417 ATRNL1Q5VV63 1379 aa8.3□□□□□ -1.08
TMC1-204ENST00000486417 PPP6R2O75170 966 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
TMC1-204ENST00000486417 CACNB3P54284 484 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 FAM160A1Q05DH4 1040 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 NCOA4Q13772 614 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 PTPAQ15257 358 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 CFAP100Q494V2 611 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 CRTC2Q53ET0 693 aaPredicted RBP8.29□□□□□ -1.08
TMC1-204ENST00000486417 POTEGQ6S5H5 508 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 NYAP1Q6ZVC0 841 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 RASGRP2Q7LDG7 609 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 SH3RF1Q7Z6J0 888 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 ZFPM1Q8IX07 1006 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 LARGE2Q8N3Y3 721 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 ARMC2Q8NEN0 867 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 ENGASEQ8NFI3 743 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 TNMDQ9H2S6 317 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 BRMS1Q9HCU9 246 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 PSMD14O00487 310 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 TCP10Q12799 353 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 SNW1Q13573 536 aaKnown RBP8.29□□□□□ -1.08
TMC1-204ENST00000486417 NPY5RQ15761 445 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 CAMK4Q16566 473 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 SLC35G1Q2M3R5 365 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 RILPL1Q5EBL4 403 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 AXDND1Q5T1B0 1012 aaPredicted RBP8.29□□□□□ -1.08
TMC1-204ENST00000486417 TMEM164Q5U3C3 297 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 NIM1KQ8IY84 436 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 JMYQ8N9B5 988 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 RNF214Q8ND24 703 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 GPKOWQ92917 476 aaPredicted RBP eCLIP8.29□□□□□ -1.08
TMC1-204ENST00000486417 LZTS2Q9BRK4 669 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 SPZ1Q9BXG8 430 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 DHX36Q9H2U1 1008 aaKnown RBP8.29□□□□□ -1.08
TMC1-204ENST00000486417 DNAJC18Q9H819 358 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 MTMR4Q9NYA4 1195 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 PIM2Q9P1W9 311 aa8.29□□□□□ -1.08
TMC1-204ENST00000486417 DDTLA6NHG4 134 aaPredicted RBP8.28□□□□□ -1.08
TMC1-204ENST00000486417 CYTH3O43739 400 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 ENTPD3O75355 529 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 RAD17O75943 681 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 VIL1P09327 827 aaKnown RBP8.28□□□□□ -1.08
TMC1-204ENST00000486417 PARP1P09874 1014 aaKnown RBP8.28□□□□□ -1.08
TMC1-204ENST00000486417 CCDC192P0DO97 292 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 MARCKSP29966 332 aaPredicted RBP8.28□□□□□ -1.08
TMC1-204ENST00000486417 TOB1P50616 345 aaPredicted RBP8.28□□□□□ -1.08
TMC1-204ENST00000486417 R3HDM1Q15032 1099 aaKnown RBP8.28□□□□□ -1.08
TMC1-204ENST00000486417 RNF135Q8IUD6 432 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 CLEC10AQ8IUN9 316 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 CKAP2LQ8IYA6 745 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 FMR1NBQ8N0W7 255 aaPredicted RBP8.28□□□□□ -1.08
TMC1-204ENST00000486417 LRRC47Q8N1G4 583 aaKnown RBP8.28□□□□□ -1.08
TMC1-204ENST00000486417 PLPP7Q8NBV4 271 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 PIBF1Q8WXW3 757 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 GMLQ99445 158 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 TDRD3Q9H7E2 651 aaKnown RBP8.28□□□□□ -1.08
TMC1-204ENST00000486417 SH3GLB2Q9NR46 395 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 ATAD5Q96QE3 1844 aa8.28□□□□□ -1.08
TMC1-204ENST00000486417 A0A1B0GVL5 298 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms