RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 MFSD3Q96ES6 412 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 GSX2Q9BZM3 304 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 RUBCNLQ9H714 662 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 TMEM39AQ9NV64 488 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 PCDHB14Q9Y5E9 798 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 USP42Q9H9J4 1324 aaKnown RBP6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 COL15A1P39059 1388 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 PRAMEF22A3QJZ6 481 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 ERVV-1B6SEH8 477 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 IRS4O14654 1257 aaPredicted RBP6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 GYS1P13807 737 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 RHBDL3P58872 404 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 MAP2K1Q02750 393 aaPredicted RBP6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 FAAP100Q0VG06 881 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 BIRC2Q13490 618 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 RPS26P11Q5JNZ5 115 aaPredicted RBP6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 DUSP27Q5VZP5 1158 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 RAVER1Q8IY67 606 aaKnown RBP6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 RBBP8NLQ8NC74 664 aaPredicted RBP6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 FAM126AQ9BYI3 521 aaPredicted RBP6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 ZNF576Q9H609 170 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 DDX21Q9NR30 783 aaKnown RBP eCLIP6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 RNF181Q9P0P0 153 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 DBF4Q9UBU7 674 aaPredicted RBP6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 ZNF652Q9Y2D9 606 aa6.91□□□□□ -1.3
NHLRC3-205ENST00000485407 C4AP0C0L4 1744 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 A0A1W2PQH9 124 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 KIF4AO95239 1232 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 FAM153BP0C7A2 387 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 EIF2S2P20042 333 aaKnown RBP6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 ITGA6P23229 1130 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 TM4SF1P30408 202 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 SOX5P35711 763 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 TGFB2P61812 414 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 NFKB2Q00653 900 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 TM4SF20Q53R12 229 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 TMEM67Q5HYA8 995 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 HABP4Q5JVS0 413 aaKnown RBP6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 CCDC30Q5VVM6 783 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 EEPD1Q7L9B9 569 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 TTC6Q86TZ1 520 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 DDX42Q86XP3 938 aaKnown RBP eCLIP6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 THNSL2Q86YJ6 484 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 NINJ1Q92982 152 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 TSR2Q969E8 191 aaKnown RBP6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 BHLHE41Q9C0J9 482 aaPredicted RBP6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 MCOLN1Q9GZU1 580 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 CAAP1Q9H8G2 361 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 CBX8Q9HC52 389 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 HYPKQ9NX55 129 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 ZFATQ9P243 1243 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 MCM8Q9UJA3 840 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 CYP8B1Q9UNU6 501 aa6.9□□□□□ -1.3
NHLRC3-205ENST00000485407 ALG1L2C9J202 215 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 CAMTA2O94983 1202 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 CT47B1P0C2W7 299 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 NFKB1P19838 968 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 STAT3P40763 770 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 PLAURQ03405 335 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 SLFN5Q08AF3 891 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 SFSWAPQ12872 951 aaKnown RBP6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 LRRC14Q15048 493 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 TWISTNBQ3B726 338 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 SAMD5Q5TGI4 173 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 RASIP1Q5U651 963 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 NLRP8Q86W28 1048 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 TRMT2AQ8IZ69 625 aaKnown RBP6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 UBR7Q8N806 425 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 CEP120Q8N960 986 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 C19orf47Q8N9M1 422 aaKnown RBP6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 C8orf58Q8NAV2 365 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 NXPE3Q969Y0 559 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 ZNF669Q96BR6 464 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 NSUN5Q96P11 429 aaKnown RBP6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 SPATA9Q9BWV2 254 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 EHMT1Q9H9B1 1298 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 PRDM16Q9HAZ2 1276 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 TLR7Q9NYK1 1049 aaKnown RBP6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 FANCIQ9NVI1 1328 aa6.89□□□□□ -1.31
NHLRC3-205ENST00000485407 NUP98P52948 1817 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 MAP3K15Q6ZN16 1313 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 GLTPD2A6NH11 291 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 PDE2AO00408 941 aaPredicted RBP6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 ALDH1L1O75891 902 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 MMP10P09238 476 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 BMP6P22004 513 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 NME2P22392 152 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 KRT24Q2M2I5 525 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 HSP90AB3PQ58FF7 597 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 PERM1Q5SV97 790 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 MRM1Q6IN84 353 aaKnown RBP6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 LLGL2Q6P1M3 1020 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 KIF6Q6ZMV9 814 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 SMIM5Q71RC9 77 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 TMEM102Q8N9M5 508 aaPredicted RBP6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 ATL2Q8NHH9 583 aa6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 COL25A1Q9BXS0 654 aaPredicted RBP6.88□□□□□ -1.31
NHLRC3-205ENST00000485407 STK31Q9BXU1 1019 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms