RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 AMNQ9BXJ7 453 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 CPVLQ9H3G5 476 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 A1CFQ9NQ94 594 aaKnown RBP18.13■□□□□ 0.49
RPP40-206ENST00000483546 NRBP1Q9UHY1 535 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 RPTORQ8N122 1335 aa18.13■□□□□ 0.49
RPP40-206ENST00000483546 ZBTB43O43298 467 aa18.12■□□□□ 0.49
RPP40-206ENST00000483546 CCL14Q16627 93 aa18.12■□□□□ 0.49
RPP40-206ENST00000483546 MICU3Q86XE3 530 aa18.12■□□□□ 0.49
RPP40-206ENST00000483546 FBXO11Q86XK2 927 aa18.12■□□□□ 0.49
RPP40-206ENST00000483546 RGS22Q8NE09 1264 aa18.12■□□□□ 0.49
RPP40-206ENST00000483546 MYL10Q9BUA6 226 aa18.12■□□□□ 0.49
RPP40-206ENST00000483546 VAT1LQ9HCJ6 419 aa18.12■□□□□ 0.49
RPP40-206ENST00000483546 HMX1Q9NP08 348 aaPredicted RBP18.12■□□□□ 0.49
RPP40-206ENST00000483546 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 KLF18A0A0U1RQI7 1052 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 CCDC196A0A1B0GTZ2 297 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 PGK2P07205 417 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 GJB1P08034 283 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 CCL5P13501 91 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 PRKAR2AP13861 404 aaKnown RBP18.11■□□□□ 0.49
RPP40-206ENST00000483546 EVCP57679 992 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
RPP40-206ENST00000483546 MUM1L1Q5H9M0 696 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 RNF208Q9H0X6 261 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 MRPL11Q9Y3B7 192 aaKnown RBP18.11■□□□□ 0.49
RPP40-206ENST00000483546 NID2Q14112 1375 aa18.11■□□□□ 0.49
RPP40-206ENST00000483546 SYNGAP1Q96PV0 1343 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 PNMA6FA0A0J9YX94 578 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 POTEB2H3BUK9 544 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 CYTH3O43739 400 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 CPA1P15085 419 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 MTFR1Q15390 333 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 RTN1Q16799 776 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 MAMDC4Q6UXC1 1216 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 MCF2L2Q86YR7 1114 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 SAMD3Q8N6K7 520 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 FAM133AQ8N9E0 248 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 CLEC4DQ8WXI8 215 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 BRF1Q92994 677 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 RRP36Q96EU6 259 aaKnown RBP18.1■□□□□ 0.49
RPP40-206ENST00000483546 TINF2Q9BSI4 451 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 PAK6Q9NQU5 681 aaPredicted RBP18.1■□□□□ 0.49
RPP40-206ENST00000483546 MAP3K20Q9NYL2 800 aaKnown RBP18.1■□□□□ 0.49
RPP40-206ENST00000483546 CYP39A1Q9NYL5 469 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 FLRT1Q9NZU1 646 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 SEC63Q9UGP8 760 aaKnown RBP18.1■□□□□ 0.49
RPP40-206ENST00000483546 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
RPP40-206ENST00000483546 CACNB2Q08289 660 aaPredicted RBP18.09■□□□□ 0.49
RPP40-206ENST00000483546 USH1GQ495M9 461 aa18.09■□□□□ 0.49
RPP40-206ENST00000483546 NSMFQ6X4W1 530 aa18.09■□□□□ 0.49
RPP40-206ENST00000483546 RNF207Q6ZRF8 634 aa18.09■□□□□ 0.49
RPP40-206ENST00000483546 TMTC3Q6ZXV5 915 aa18.09■□□□□ 0.49
RPP40-206ENST00000483546 PIGSQ96S52 555 aa18.09■□□□□ 0.49
RPP40-206ENST00000483546 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPP40-206ENST00000483546 UNC93B1Q9H1C4 597 aa18.09■□□□□ 0.49
RPP40-206ENST00000483546 ALDH8A1Q9H2A2 487 aaPredicted RBP18.09■□□□□ 0.49
RPP40-206ENST00000483546 ADD3Q9UEY8 706 aaKnown RBP18.09■□□□□ 0.49
RPP40-206ENST00000483546 LCTP09848 1927 aa18.09■□□□□ 0.49
RPP40-206ENST00000483546 CENPFP49454 3210 aa18.09■□□□□ 0.49
RPP40-206ENST00000483546 GOLGA8AA7E2F4 631 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 GOLGA8BA8MQT2 603 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 NFIBO00712 420 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 MSCO60682 206 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 SEC24BO95487 1268 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 RXRAP19793 462 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 SLC35G1Q2M3R5 365 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 HOMER1Q86YM7 354 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 PCDHA1Q9Y5I3 950 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 MCM3APO60318 1980 aa18.08■□□□□ 0.48
RPP40-206ENST00000483546 ASB14A6NK59 587 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 PLEKHA8P1O95397 391 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 CYBAP13498 195 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 CYP2C19P33261 490 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 GJA8P48165 433 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 METAP2P50579 478 aaKnown RBP eCLIP18.07■□□□□ 0.48
RPP40-206ENST00000483546 GHRHRQ02643 423 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 APOBRQ0VD83 1088 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 TRIM32Q13049 653 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 BAATQ14032 418 aaPredicted RBP18.07■□□□□ 0.48
RPP40-206ENST00000483546 ANKRD1Q15327 319 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 CCDC144CPQ8IYA2 1237 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 SRBD1Q8N5C6 995 aaKnown RBP18.07■□□□□ 0.48
RPP40-206ENST00000483546 MPHOSPH6Q99547 160 aaKnown RBP18.07■□□□□ 0.48
RPP40-206ENST00000483546 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
RPP40-206ENST00000483546 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
RPP40-206ENST00000483546 PDRG1Q9NUG6 133 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 CNPY2Q9Y2B0 182 aa18.07■□□□□ 0.48
RPP40-206ENST00000483546 PTPDC1A2A3K4 754 aa18.06■□□□□ 0.48
RPP40-206ENST00000483546 B4DLN1 442 aa18.06■□□□□ 0.48
RPP40-206ENST00000483546 CAPN15O75808 1086 aa18.06■□□□□ 0.48
RPP40-206ENST00000483546 MYCP01106 439 aaPredicted RBP18.06■□□□□ 0.48
RPP40-206ENST00000483546 RGS19P49795 217 aa18.06■□□□□ 0.48
RPP40-206ENST00000483546 MRPL12P52815 198 aaKnown RBP18.06■□□□□ 0.48
RPP40-206ENST00000483546 SOX10P56693 466 aa18.06■□□□□ 0.48
RPP40-206ENST00000483546 RPS6P62753 249 aaKnown RBP18.06■□□□□ 0.48
RPP40-206ENST00000483546 TOB2Q14106 344 aaPredicted RBP18.06■□□□□ 0.48
RPP40-206ENST00000483546 DNERQ8NFT8 737 aa18.06■□□□□ 0.48
RPP40-206ENST00000483546 ZNF274Q96GC6 653 aaPredicted RBP18.06■□□□□ 0.48
RPP40-206ENST00000483546 FGD4Q96M96 766 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms