RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 GTF3C3Q9Y5Q9 886 aa18.91■□□□□ 0.62
COL2A1-206ENST00000483376 CYP46A1Q9Y6A2 500 aa18.91■□□□□ 0.62
COL2A1-206ENST00000483376 ABCB11O95342 1321 aa18.91■□□□□ 0.62
COL2A1-206ENST00000483376 KIAA0100Q14667 2235 aaKnown RBP18.9■□□□□ 0.62
COL2A1-206ENST00000483376 LOC102724159A0A0B4J2E5 919 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 GJB1P08034 283 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 CCL5P13501 91 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 GHRHRQ02643 423 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 PWP2Q15269 919 aaKnown RBP18.9■□□□□ 0.62
COL2A1-206ENST00000483376 MUM1L1Q5H9M0 696 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 Q6ZUG5 572 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 FBXO11Q86XK2 927 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 FAM133AQ8N9E0 248 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 MYL10Q9BUA6 226 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 TMEM106CQ9BVX2 250 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 AMNQ9BXJ7 453 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 HOMER2Q9NSB8 354 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 CYP39A1Q9NYL5 469 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 BRPF3Q9ULD4 1205 aa18.9■□□□□ 0.62
COL2A1-206ENST00000483376 PNMA6FA0A0J9YX94 578 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 ZBTB43O43298 467 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 DHX16O60231 1041 aaKnown RBP18.89■□□□□ 0.61
COL2A1-206ENST00000483376 SEC24BO95487 1268 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 PGK2P07205 417 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 PRKAR2AP13861 404 aaKnown RBP18.89■□□□□ 0.61
COL2A1-206ENST00000483376 CPA1P15085 419 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 RGS19P49795 217 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 MTFR1Q15390 333 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 TMTC3Q6ZXV5 915 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 MICU3Q86XE3 530 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 SAMD3Q8N6K7 520 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 ALDH8A1Q9H2A2 487 aaPredicted RBP18.89■□□□□ 0.61
COL2A1-206ENST00000483376 HMX1Q9NP08 348 aaPredicted RBP18.89■□□□□ 0.61
COL2A1-206ENST00000483376 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
COL2A1-206ENST00000483376 SYNGAP1Q96PV0 1343 aa18.89■□□□□ 0.61
COL2A1-206ENST00000483376 KLF18A0A0U1RQI7 1052 aa18.88■□□□□ 0.61
COL2A1-206ENST00000483376 SLC4A3P48751 1232 aa18.88■□□□□ 0.61
COL2A1-206ENST00000483376 FGD1P98174 961 aa18.88■□□□□ 0.61
COL2A1-206ENST00000483376 CACNB2Q08289 660 aaPredicted RBP18.88■□□□□ 0.61
COL2A1-206ENST00000483376 BRF1Q92994 677 aa18.88■□□□□ 0.61
COL2A1-206ENST00000483376 FGD4Q96M96 766 aa18.88■□□□□ 0.61
COL2A1-206ENST00000483376 TINF2Q9BSI4 451 aa18.88■□□□□ 0.61
COL2A1-206ENST00000483376 RNF208Q9H0X6 261 aa18.88■□□□□ 0.61
COL2A1-206ENST00000483376 UNC93B1Q9H1C4 597 aa18.88■□□□□ 0.61
COL2A1-206ENST00000483376 MRPL11Q9Y3B7 192 aaKnown RBP18.88■□□□□ 0.61
COL2A1-206ENST00000483376 CCDC196A0A1B0GTZ2 297 aa18.87■□□□□ 0.61
COL2A1-206ENST00000483376 POTEB2H3BUK9 544 aa18.87■□□□□ 0.61
COL2A1-206ENST00000483376 NFIBO00712 420 aa18.87■□□□□ 0.61
COL2A1-206ENST00000483376 CYBAP13498 195 aa18.87■□□□□ 0.61
COL2A1-206ENST00000483376 GJA8P48165 433 aa18.87■□□□□ 0.61
COL2A1-206ENST00000483376 TRIM32Q13049 653 aa18.87■□□□□ 0.61
COL2A1-206ENST00000483376 MCF2L2Q86YR7 1114 aa18.87■□□□□ 0.61
COL2A1-206ENST00000483376 SRBD1Q8N5C6 995 aaKnown RBP18.87■□□□□ 0.61
COL2A1-206ENST00000483376 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.87■□□□□ 0.61
COL2A1-206ENST00000483376 VAT1LQ9HCJ6 419 aa18.87■□□□□ 0.61
COL2A1-206ENST00000483376 MAP3K20Q9NYL2 800 aaKnown RBP18.87■□□□□ 0.61
COL2A1-206ENST00000483376 PPP1R11O60927 126 aaPredicted RBP18.86■□□□□ 0.61
COL2A1-206ENST00000483376 PLEKHA8P1O95397 391 aa18.86■□□□□ 0.61
COL2A1-206ENST00000483376 TOB2Q14106 344 aaPredicted RBP18.86■□□□□ 0.61
COL2A1-206ENST00000483376 RTN1Q16799 776 aa18.86■□□□□ 0.61
COL2A1-206ENST00000483376 MORC4Q8TE76 937 aa18.86■□□□□ 0.61
COL2A1-206ENST00000483376 RRP36Q96EU6 259 aaKnown RBP18.86■□□□□ 0.61
COL2A1-206ENST00000483376 PIGSQ96S52 555 aa18.86■□□□□ 0.61
COL2A1-206ENST00000483376 CRISPLD2Q9H0B8 497 aa18.86■□□□□ 0.61
COL2A1-206ENST00000483376 FAM217BQ9NTX9 383 aaPredicted RBP18.86■□□□□ 0.61
COL2A1-206ENST00000483376 SMCHD1A6NHR9 2005 aa18.86■□□□□ 0.61
COL2A1-206ENST00000483376 PLXNA1Q9UIW2 1896 aa18.86■□□□□ 0.61
COL2A1-206ENST00000483376 MSCO60682 206 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 RXRAP19793 462 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 CYP2C19P33261 490 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 APOBRQ0VD83 1088 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 FUT2Q10981 343 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 USH1GQ495M9 461 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 NSMFQ6X4W1 530 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 RNF207Q6ZRF8 634 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 TEX2Q8IWB9 1127 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 DNERQ8NFT8 737 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 ZNF274Q96GC6 653 aaPredicted RBP18.85■□□□□ 0.61
COL2A1-206ENST00000483376 UPF3BQ9BZI7 483 aaKnown RBP18.85■□□□□ 0.61
COL2A1-206ENST00000483376 ADD3Q9UEY8 706 aaKnown RBP18.85■□□□□ 0.61
COL2A1-206ENST00000483376 PCDHA1Q9Y5I3 950 aa18.85■□□□□ 0.61
COL2A1-206ENST00000483376 MKI67P46013 3256 aaKnown RBP18.85■□□□□ 0.61
COL2A1-206ENST00000483376 POTEFA5A3E0 1075 aa18.84■□□□□ 0.61
COL2A1-206ENST00000483376 SOWAHBA6NEL2 793 aa18.84■□□□□ 0.61
COL2A1-206ENST00000483376 ASB14A6NK59 587 aa18.84■□□□□ 0.61
COL2A1-206ENST00000483376 GOLGA8AA7E2F4 631 aa18.84■□□□□ 0.61
COL2A1-206ENST00000483376 GOLGA8BA8MQT2 603 aa18.84■□□□□ 0.61
COL2A1-206ENST00000483376 SGPL1O95470 568 aa18.84■□□□□ 0.61
COL2A1-206ENST00000483376 TAL1P17542 331 aaPredicted RBP18.84■□□□□ 0.61
COL2A1-206ENST00000483376 METAP2P50579 478 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL2A1-206ENST00000483376 RPS6P62753 249 aaKnown RBP18.84■□□□□ 0.61
COL2A1-206ENST00000483376 BAATQ14032 418 aaPredicted RBP18.84■□□□□ 0.61
COL2A1-206ENST00000483376 HOMER1Q86YM7 354 aa18.84■□□□□ 0.61
COL2A1-206ENST00000483376 U2AF1L4Q8WU68 220 aaKnown RBP18.84■□□□□ 0.61
COL2A1-206ENST00000483376 PDRG1Q9NUG6 133 aa18.84■□□□□ 0.61
COL2A1-206ENST00000483376 SEC63Q9UGP8 760 aaKnown RBP18.84■□□□□ 0.61
COL2A1-206ENST00000483376 ASTN1O14525 1302 aa18.83■□□□□ 0.61
COL2A1-206ENST00000483376 CNTNAP5Q8WYK1 1306 aa18.83■□□□□ 0.61
COL2A1-206ENST00000483376 OPLAHO14841 1288 aa18.83■□□□□ 0.6
COL2A1-206ENST00000483376 PDIA3P30101 505 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms