RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 MAF1Q9H063 256 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 XPNPEP3Q9NQH7 507 aa16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-208ENST00000477928 ICAM1P05362 532 aa16.17■□□□□ 0.18
SOX2-OT-208ENST00000477928 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
SOX2-OT-208ENST00000477928 MAMDC4Q6UXC1 1216 aa16.17■□□□□ 0.18
SOX2-OT-208ENST00000477928 CCDC144CPQ8IYA2 1237 aa16.17■□□□□ 0.18
SOX2-OT-208ENST00000477928 PNMA1Q8ND90 353 aa16.17■□□□□ 0.18
SOX2-OT-208ENST00000477928 NCOA7Q8NI08 942 aa16.17■□□□□ 0.18
SOX2-OT-208ENST00000477928 KATNBL1Q9H079 304 aa16.17■□□□□ 0.18
SOX2-OT-208ENST00000477928 CNPY2Q9Y2B0 182 aa16.17■□□□□ 0.18
SOX2-OT-208ENST00000477928 SYNGAP1Q96PV0 1343 aa16.17■□□□□ 0.18
SOX2-OT-208ENST00000477928 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 POTEB2H3BUK9 544 aa16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 MAGEA10P43363 369 aaPredicted RBP16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 SART3Q15020 963 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 SLC30A10Q6XR72 485 aa16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 ZNF467Q7Z7K2 595 aaPredicted RBP16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 CLEC4DQ8WXI8 215 aa16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 KAT14Q9H8E8 782 aa16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 CYP39A1Q9NYL5 469 aa16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 PLXNA1Q9UIW2 1896 aa16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 SYNRGQ9UMZ2 1314 aa16.16■□□□□ 0.18
SOX2-OT-208ENST00000477928 KBTBD13C9JR72 458 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 ADAMTS4O75173 837 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 CDC45O75419 566 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 RARBP10826 455 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 AKR1A1P14550 325 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 RTP1P59025 263 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 ACVR2BQ13705 512 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 BAATQ14032 418 aaPredicted RBP16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 SEC23AQ15436 765 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 SLC35G1Q2M3R5 365 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 ASPRV1Q53RT3 343 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 EEPD1Q7L9B9 569 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 CHST3Q7LGC8 479 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 RALYLQ86SE5 291 aaKnown RBP16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 GDF15Q99988 308 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 LSG1Q9H089 658 aaKnown RBP16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 PDGFCQ9NRA1 345 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 PPP4R2Q9NY27 417 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 ATP11BQ9Y2G3 1177 aa16.15■□□□□ 0.18
SOX2-OT-208ENST00000477928 ERICH2A1L162 156 aa16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 SOX1O00570 391 aaPredicted RBP16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 CCDC144BQ3MJ40 725 aa16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 USH1GQ495M9 461 aa16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 TRIM60Q495X7 471 aa16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 IFIT1BQ5T764 474 aaKnown RBP16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 RNF20Q5VTR2 975 aa16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 STAG2Q8N3U4 1231 aa16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 ARRDC4Q8NCT1 418 aa16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 GPHNQ9NQX3 736 aaPredicted RBP16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 RBM8AQ9Y5S9 174 aaKnown RBP16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 WDR19Q8NEZ3 1342 aa16.14■□□□□ 0.17
SOX2-OT-208ENST00000477928 LAMA3Q16787 3333 aa16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 LOC102724159A0A0B4J2E5 919 aa16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 E7EWF7 191 aa16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 ANTXR2P58335 489 aa16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 MDM2Q00987 491 aaPredicted RBP16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 PWP2Q15269 919 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 SLC39A5Q6ZMH5 540 aa16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 SH3RF1Q7Z6J0 888 aa16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 FBXO16Q8IX29 292 aaPredicted RBP16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 TBC1D5Q92609 795 aa16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 FAM184BQ9ULE4 1060 aa16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 PHF24Q9UPV7 400 aa16.13■□□□□ 0.17
SOX2-OT-208ENST00000477928 A0A1W2PQ45 241 aaPredicted RBP16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 A0A1W2PQY0 241 aa16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 CTAGE5O15320 804 aa16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 EPB41L2O43491 1005 aaKnown RBP16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 CALML3P27482 149 aa16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 NECTIN1Q15223 517 aa16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 ADGRF4Q8IZF3 695 aa16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 TMTC2Q8N394 836 aa16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
SOX2-OT-208ENST00000477928 SZT2Q5T011 3432 aa16.11■□□□□ 0.17
SOX2-OT-208ENST00000477928 PARP1P09874 1014 aaKnown RBP16.11■□□□□ 0.17
SOX2-OT-208ENST00000477928 BEX3Q00994 111 aa16.11■□□□□ 0.17
SOX2-OT-208ENST00000477928 CDC37Q16543 378 aaPredicted RBP16.11■□□□□ 0.17
SOX2-OT-208ENST00000477928 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
SOX2-OT-208ENST00000477928 LRCH3Q96II8 777 aa16.11■□□□□ 0.17
SOX2-OT-208ENST00000477928 MAP3K14Q99558 947 aa16.11■□□□□ 0.17
SOX2-OT-208ENST00000477928 ABHD16BQ9H3Z7 469 aa16.11■□□□□ 0.17
SOX2-OT-208ENST00000477928 TRIM43BA6NCK2 446 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 PPP1R11O60927 126 aaPredicted RBP16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 ACLYP53396 1101 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 SNX17Q15036 470 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 KCNA10Q16322 511 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 QRICH1Q2TAL8 776 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 TSGA10IPQ3SY00 556 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 TAPT1Q6NXT6 567 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 MB21D2Q8IYB1 491 aaPredicted RBP16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 KLHDC9Q8NEP7 349 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 TRIM43Q96BQ3 446 aaPredicted RBP16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 TMEM87BQ96K49 555 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 JMJD4Q9H9V9 463 aa16.1■□□□□ 0.17
SOX2-OT-208ENST00000477928 IFIT3O14879 490 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms