RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 PRRC2BQ5JSZ5 2229 aaKnown RBP13.59□□□□□ -0.23
LSM2-212ENST00000477182 A0A0G2JMZ2 1700 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 SLC25A27O95847 323 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 CDK7P50613 346 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 KCNA10Q16322 511 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 PCSK9Q8NBP7 692 aaKnown RBP13.58□□□□□ -0.24
LSM2-212ENST00000477182 KLHDC9Q8NEP7 349 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 HLA-CQ95604 372 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 DYNLL2Q96FJ2 89 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 PPP1R12CQ9BZL4 782 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 TANGO6Q9C0B7 1094 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 KCNH6Q9H252 994 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 SERPINB13Q9UIV8 391 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 MTCH2Q9Y6C9 303 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 SYNRGQ9UMZ2 1314 aa13.58□□□□□ -0.24
LSM2-212ENST00000477182 A0A0U1RQG5 324 aaPredicted RBP13.57□□□□□ -0.24
LSM2-212ENST00000477182 SLC3A2P08195 630 aaKnown RBP13.57□□□□□ -0.24
LSM2-212ENST00000477182 ZNF865P0CJ78 1059 aaPredicted RBP13.57□□□□□ -0.24
LSM2-212ENST00000477182 RBM25P49756 843 aaKnown RBP13.57□□□□□ -0.24
LSM2-212ENST00000477182 STOX1Q6ZVD7 989 aa13.57□□□□□ -0.24
LSM2-212ENST00000477182 VTI1AQ96AJ9 217 aa13.57□□□□□ -0.24
LSM2-212ENST00000477182 MMP19Q99542 508 aa13.57□□□□□ -0.24
LSM2-212ENST00000477182 EHD4Q9H223 541 aa13.57□□□□□ -0.24
LSM2-212ENST00000477182 INCENPQ9NQS7 918 aa13.57□□□□□ -0.24
LSM2-212ENST00000477182 FAM184BQ9ULE4 1060 aa13.57□□□□□ -0.24
LSM2-212ENST00000477182 SLC4A7Q9Y6M7 1214 aa13.57□□□□□ -0.24
LSM2-212ENST00000477182 E7EWF7 191 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 ARVCFO00192 962 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 CST5P28325 142 aaPredicted RBP13.56□□□□□ -0.24
LSM2-212ENST00000477182 DSG3P32926 999 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 GABPAQ06546 454 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 TSGA10IPQ3SY00 556 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 CCSAPQ6IQ19 270 aaPredicted RBP13.56□□□□□ -0.24
LSM2-212ENST00000477182 C16orf86Q6ZW13 317 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 MSL3Q8N5Y2 521 aaKnown RBP13.56□□□□□ -0.24
LSM2-212ENST00000477182 STAG1Q8WVM7 1258 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.24
LSM2-212ENST00000477182 SPC25Q9HBM1 224 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 NEDD4P46934 1319 aa13.56□□□□□ -0.24
LSM2-212ENST00000477182 DUSP11O75319 330 aaKnown RBP13.55□□□□□ -0.24
LSM2-212ENST00000477182 PRDM1O75626 825 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 TAL1P17542 331 aaPredicted RBP13.55□□□□□ -0.24
LSM2-212ENST00000477182 CYP2C18P33260 490 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 CDK8P49336 464 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 RABGGTBP53611 331 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 ANAPC15P60006 121 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 NHLH1Q02575 133 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 PDE4BQ07343 736 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 KRT32Q14532 448 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 KCTD2Q14681 263 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 ZNF792Q3KQV3 632 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 RRP12Q5JTH9 1297 aaKnown RBP13.55□□□□□ -0.24
LSM2-212ENST00000477182 MFSD6Q6ZSS7 791 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 OTOP2Q7RTS6 562 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 FAM126BQ8IXS8 530 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 RPUSD2Q8IZ73 545 aaKnown RBP13.55□□□□□ -0.24
LSM2-212ENST00000477182 LENG1Q96BZ8 264 aaPredicted RBP13.55□□□□□ -0.24
LSM2-212ENST00000477182 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
LSM2-212ENST00000477182 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
LSM2-212ENST00000477182 TOMM22Q9NS69 142 aa13.55□□□□□ -0.24
LSM2-212ENST00000477182 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
LSM2-212ENST00000477182 B4E1Z4 1266 aa13.54□□□□□ -0.24
LSM2-212ENST00000477182 FLOT1O75955 427 aa13.54□□□□□ -0.24
LSM2-212ENST00000477182 ASGR1P07306 291 aa13.54□□□□□ -0.24
LSM2-212ENST00000477182 SHMT1P34896 483 aa13.54□□□□□ -0.24
LSM2-212ENST00000477182 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
LSM2-212ENST00000477182 CSPP1Q1MSJ5 1256 aa13.54□□□□□ -0.24
LSM2-212ENST00000477182 KIF2CQ99661 725 aa13.54□□□□□ -0.24
LSM2-212ENST00000477182 MKNK2Q9HBH9 465 aa13.54□□□□□ -0.24
LSM2-212ENST00000477182 GREB1LQ9C091 1923 aaPredicted RBP13.54□□□□□ -0.24
LSM2-212ENST00000477182 MYH4Q9Y623 1939 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 ORC4O43929 436 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 CD4P01730 458 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 PGK2P07205 417 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 FGRP09769 529 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 C6orf222P0C671 652 aaPredicted RBP13.53□□□□□ -0.24
LSM2-212ENST00000477182 ALADP13716 330 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 CPA1P15085 419 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
LSM2-212ENST00000477182 COPB2P35606 906 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 TRDNQ13061 729 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 TMEM67Q5HYA8 995 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
LSM2-212ENST00000477182 NCOA7Q8NI08 942 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 IL17RAQ96F46 866 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 NEK1Q96PY6 1258 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 HIPK3Q9H422 1215 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 CNNM2Q9H8M5 875 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 SWAP70Q9UH65 585 aa13.53□□□□□ -0.24
LSM2-212ENST00000477182 RANBP6O60518 1105 aaKnown RBP13.52□□□□□ -0.25
LSM2-212ENST00000477182 KDM4AO75164 1064 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.25
LSM2-212ENST00000477182 MYOGP15173 224 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 CASTP20810 708 aaKnown RBP13.52□□□□□ -0.25
LSM2-212ENST00000477182 RASA1P20936 1047 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 PSMA5P28066 241 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 GUCY1A2P33402 732 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 SEPT2Q15019 361 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms