RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 RPGRIP1Q96KN7 1286 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 CCDC42Q96M95 316 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 NOC4LQ9BVI4 516 aaKnown RBP18.22■□□□□ 0.51
TPR-205ENST00000474852 TTYH3Q9C0H2 523 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 POLD4Q9HCU8 107 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 JRKLQ9Y4A0 524 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 ANKRD36CQ5JPF3 1778 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 PLCH1Q4KWH8 1693 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 FCER1AP12319 257 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 ARL6IP4Q66PJ3 421 aaKnown RBP18.22■□□□□ 0.51
TPR-205ENST00000474852 ANKRD40Q6AI12 368 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 STAG2Q8N3U4 1231 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 ANKRD13CQ8N6S4 541 aa18.22■□□□□ 0.51
TPR-205ENST00000474852 COL1A1P02452 1464 aaPredicted RBP18.21■□□□□ 0.51
TPR-205ENST00000474852 NUTM2BA6NNL0 878 aaPredicted RBP18.21■□□□□ 0.51
TPR-205ENST00000474852 NUTM2EB1AL46 878 aaPredicted RBP18.21■□□□□ 0.51
TPR-205ENST00000474852 ERVV-1B6SEH8 477 aa18.21■□□□□ 0.51
TPR-205ENST00000474852 MOCS3O95396 460 aa18.21■□□□□ 0.51
TPR-205ENST00000474852 PDE4DQ08499 809 aa18.21■□□□□ 0.51
TPR-205ENST00000474852 SPA17Q15506 151 aa18.21■□□□□ 0.51
TPR-205ENST00000474852 GIMAP8Q8ND71 665 aaPredicted RBP18.21■□□□□ 0.51
TPR-205ENST00000474852 FAM207AQ9NSI2 230 aaPredicted RBP18.21■□□□□ 0.51
TPR-205ENST00000474852 CICQ96RK0 1608 aaPredicted RBP18.21■□□□□ 0.51
TPR-205ENST00000474852 LRP5O75197 1615 aa18.21■□□□□ 0.51
TPR-205ENST00000474852 ZBED6P86452 979 aa18.21■□□□□ 0.51
TPR-205ENST00000474852 STK4Q13043 487 aa18.21■□□□□ 0.51
TPR-205ENST00000474852 NFRKBQ6P4R8 1299 aa18.21■□□□□ 0.51
TPR-205ENST00000474852 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
TPR-205ENST00000474852 DNA2P51530 1060 aa18.2■□□□□ 0.5
TPR-205ENST00000474852 IRAK1P51617 712 aa18.2■□□□□ 0.5
TPR-205ENST00000474852 CCDC70Q6NSX1 233 aa18.2■□□□□ 0.5
TPR-205ENST00000474852 C2CD5Q86YS7 1000 aa18.2■□□□□ 0.5
TPR-205ENST00000474852 BRIP1Q9BX63 1249 aa18.2■□□□□ 0.5
TPR-205ENST00000474852 FAM184BQ9ULE4 1060 aa18.2■□□□□ 0.5
TPR-205ENST00000474852 LIG3P49916 1009 aa18.2■□□□□ 0.5
TPR-205ENST00000474852 VAV2P52735 878 aa18.2■□□□□ 0.5
TPR-205ENST00000474852 CREG2Q8IUH2 290 aa18.2■□□□□ 0.5
TPR-205ENST00000474852 IFIH1Q9BYX4 1025 aaKnown RBP18.2■□□□□ 0.5
TPR-205ENST00000474852 NIP7Q9Y221 180 aaKnown RBP eCLIP18.2■□□□□ 0.5
TPR-205ENST00000474852 NCK2O43639 380 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 RHOBTB3O94955 611 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 ASIC1P78348 528 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 ATP2B2Q01814 1243 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 HEATR3Q7Z4Q2 680 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 BCAS4Q8TDM0 211 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 AENQ8WTP8 325 aaKnown RBP18.19■□□□□ 0.5
TPR-205ENST00000474852 DEF6Q9H4E7 631 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 SNX12Q9UMY4 172 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 ANO9A1A5B4 782 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 EPHB6O15197 1021 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 PLCG1P19174 1290 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 P2RX5Q93086 422 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 YY1AP1Q9H869 796 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 PCDHA4Q9UN74 947 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 EXOC5O00471 708 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 CALML3P27482 149 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 GNGT1P63211 74 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 KCNB1Q14721 858 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 IQCEQ6IPM2 695 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 CCDC170Q8IYT3 715 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 CAPS2Q9BXY5 557 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 KBTBD4Q9NVX7 518 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 SAMM50Q9Y512 469 aa18.19■□□□□ 0.5
TPR-205ENST00000474852 COL4A1P02462 1669 aa18.18■□□□□ 0.5
TPR-205ENST00000474852 MIIPQ5JXC2 388 aa18.18■□□□□ 0.5
TPR-205ENST00000474852 CCDC181Q5TID7 509 aa18.18■□□□□ 0.5
TPR-205ENST00000474852 TADA2BQ86TJ2 420 aa18.18■□□□□ 0.5
TPR-205ENST00000474852 SPATA4Q8NEY3 305 aa18.18■□□□□ 0.5
TPR-205ENST00000474852 EFCAB13Q8IY85 973 aa18.18■□□□□ 0.5
TPR-205ENST00000474852 NUP58Q9BVL2 599 aa18.18■□□□□ 0.5
TPR-205ENST00000474852 CPVLQ9H3G5 476 aa18.18■□□□□ 0.5
TPR-205ENST00000474852 DCP1AQ9NPI6 582 aaPredicted RBP18.18■□□□□ 0.5
TPR-205ENST00000474852 ARHGAP20Q9P2F6 1191 aa18.18■□□□□ 0.5
TPR-205ENST00000474852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
TPR-205ENST00000474852 ZPR1O75312 459 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 TACC1O75410 805 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 GUCY2CP25092 1073 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 KLRK1P26718 216 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 KCTD16Q68DU8 428 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 RCSD1Q6JBY9 416 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 ANKRD18AQ8IVF6 992 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 TSEN2Q8NCE0 465 aaKnown RBP18.17■□□□□ 0.5
TPR-205ENST00000474852 MMRN2Q9H8L6 949 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 SLC39A2Q9NP94 309 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 GEMIN8Q9NWZ8 242 aaKnown RBP18.17■□□□□ 0.5
TPR-205ENST00000474852 PCDHA13Q9Y5I0 950 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 AKR1B10O60218 316 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 CCNE1P24864 410 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 TXNRD1Q16881 649 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 CAVIN4Q5BKX8 364 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 GPATCH11Q8N954 259 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 TRIM58Q8NG06 486 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 ARL8AQ96BM9 186 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 PURBQ96QR8 312 aaKnown RBP18.17■□□□□ 0.5
TPR-205ENST00000474852 PCDHA6Q9UN73 950 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 PCDHA8Q9Y5H6 950 aa18.17■□□□□ 0.5
TPR-205ENST00000474852 ITGB4P16144 1822 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 EBAG9O00559 213 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 USO1O60763 962 aaKnown RBP18.16■□□□□ 0.5
TPR-205ENST00000474852 SHOX2O60902 331 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms