RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PDIA3P30101 505 aaKnown RBP19.67■□□□□ 0.74
SCAF11-206ENST00000474828 KCTD2Q14681 263 aa19.67■□□□□ 0.74
SCAF11-206ENST00000474828 MUM1L1Q5H9M0 696 aa19.67■□□□□ 0.74
SCAF11-206ENST00000474828 ZNF467Q7Z7K2 595 aaPredicted RBP19.67■□□□□ 0.74
SCAF11-206ENST00000474828 MICU3Q86XE3 530 aa19.67■□□□□ 0.74
SCAF11-206ENST00000474828 NPLOC4Q8TAT6 608 aa19.67■□□□□ 0.74
SCAF11-206ENST00000474828 TRIB2Q92519 343 aa19.67■□□□□ 0.74
SCAF11-206ENST00000474828 C22orf23Q9BZE7 217 aa19.67■□□□□ 0.74
SCAF11-206ENST00000474828 A1CFQ9NQ94 594 aaKnown RBP19.67■□□□□ 0.74
SCAF11-206ENST00000474828 PDRG1Q9NUG6 133 aa19.67■□□□□ 0.74
SCAF11-206ENST00000474828 ALAS1P13196 640 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 RXRAP19793 462 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 CYP2B6P20813 491 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 CDC27P30260 824 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 TRAF1Q13077 416 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 SLC9C1Q4G0N8 1177 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 WDR78Q5VTH9 848 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 MAMDC4Q6UXC1 1216 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 FBXO11Q86XK2 927 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 MSL3Q8N5Y2 521 aaKnown RBP19.66■□□□□ 0.74
SCAF11-206ENST00000474828 FAM133AQ8N9E0 248 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 FGD4Q96M96 766 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 PIGSQ96S52 555 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 AMNQ9BXJ7 453 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 PFASO15067 1338 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 ABCB11O95342 1321 aa19.66■□□□□ 0.74
SCAF11-206ENST00000474828 OPLAHO14841 1288 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 HMGCRP04035 888 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 FGD1P98174 961 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 NTRK3Q16288 839 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 RTN1Q16799 776 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 SAMD3Q8N6K7 520 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 MAML3Q96JK9 1138 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 CWC22Q9HCG8 908 aaKnown RBP19.65■□□□□ 0.74
SCAF11-206ENST00000474828 VAT1LQ9HCJ6 419 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 SLC5A4Q9NY91 659 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 CYP39A1Q9NYL5 469 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 FLRT1Q9NZU1 646 aa19.65■□□□□ 0.74
SCAF11-206ENST00000474828 SMCHD1A6NHR9 2005 aa19.64■□□□□ 0.74
SCAF11-206ENST00000474828 BRCA2P51587 3418 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 LOC102724159A0A0B4J2E5 919 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 CCDC196A0A1B0GTZ2 297 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 GOLGA8AA7E2F4 631 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 GOLGA8BA8MQT2 603 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 NFIBO00712 420 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 ELNP15502 786 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 PWP2Q15269 919 aaKnown RBP19.64■□□□□ 0.73
SCAF11-206ENST00000474828 ANKRD1Q15327 319 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 CCL14Q16627 93 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 DPP9Q86TI2 863 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 SH3TC2Q8TF17 1288 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 TBC1D32Q96NH3 1257 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 CNTNAP5Q8WYK1 1306 aa19.64■□□□□ 0.73
SCAF11-206ENST00000474828 ZNFX1Q9P2E3 1918 aaKnown RBP19.64■□□□□ 0.73
SCAF11-206ENST00000474828 TAL1P17542 331 aaPredicted RBP19.63■□□□□ 0.73
SCAF11-206ENST00000474828 ADD1P35611 737 aaKnown RBP19.63■□□□□ 0.73
SCAF11-206ENST00000474828 METAP2P50579 478 aaKnown RBP eCLIP19.63■□□□□ 0.73
SCAF11-206ENST00000474828 TEX2Q8IWB9 1127 aa19.63■□□□□ 0.73
SCAF11-206ENST00000474828 CCDC144CPQ8IYA2 1237 aa19.63■□□□□ 0.73
SCAF11-206ENST00000474828 ANKRD35Q8N283 1001 aa19.63■□□□□ 0.73
SCAF11-206ENST00000474828 RRP36Q96EU6 259 aaKnown RBP19.63■□□□□ 0.73
SCAF11-206ENST00000474828 HOMER2Q9NSB8 354 aa19.63■□□□□ 0.73
SCAF11-206ENST00000474828 MAP3K20Q9NYL2 800 aaKnown RBP19.63■□□□□ 0.73
SCAF11-206ENST00000474828 NRBP1Q9UHY1 535 aa19.63■□□□□ 0.73
SCAF11-206ENST00000474828 MRPL11Q9Y3B7 192 aaKnown RBP19.63■□□□□ 0.73
SCAF11-206ENST00000474828 ASTN1O14525 1302 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 INHAP05111 366 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 PGK2P07205 417 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 AK2P54819 239 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 SOX10P56693 466 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 RAB11FIP4Q86YS3 637 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 MORC4Q8TE76 937 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 DDX11Q96FC9 970 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 TPCN1Q9ULQ1 816 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 PCDHA1Q9Y5I3 950 aa19.62■□□□□ 0.73
SCAF11-206ENST00000474828 SYNGAP1Q96PV0 1343 aa19.61■□□□□ 0.73
SCAF11-206ENST00000474828 SOWAHBA6NEL2 793 aa19.61■□□□□ 0.73
SCAF11-206ENST00000474828 DHX16O60231 1041 aaKnown RBP19.61■□□□□ 0.73
SCAF11-206ENST00000474828 IFNAR1P17181 557 aa19.61■□□□□ 0.73
SCAF11-206ENST00000474828 HOXD11P31277 338 aaPredicted RBP19.61■□□□□ 0.73
SCAF11-206ENST00000474828 HSD17B4P51659 736 aa19.61■□□□□ 0.73
SCAF11-206ENST00000474828 NEK4P51957 841 aa19.61■□□□□ 0.73
SCAF11-206ENST00000474828 CMTR1Q8N1G2 835 aaKnown RBP19.61■□□□□ 0.73
SCAF11-206ENST00000474828 TINF2Q9BSI4 451 aa19.61■□□□□ 0.73
SCAF11-206ENST00000474828 UPF2Q9HAU5 1272 aaKnown RBP19.61■□□□□ 0.73
SCAF11-206ENST00000474828 PAK6Q9NQU5 681 aaPredicted RBP19.61■□□□□ 0.73
SCAF11-206ENST00000474828 LCTP09848 1927 aa19.61■□□□□ 0.73
SCAF11-206ENST00000474828 RBBP6Q7Z6E9 1792 aaKnown RBP19.6■□□□□ 0.73
SCAF11-206ENST00000474828 PFKFB2O60825 505 aa19.6■□□□□ 0.73
SCAF11-206ENST00000474828 CAPN2P17655 700 aa19.6■□□□□ 0.73
SCAF11-206ENST00000474828 RPS6P62753 249 aaKnown RBP19.6■□□□□ 0.73
SCAF11-206ENST00000474828 UBXN2AP68543 259 aa19.6■□□□□ 0.73
SCAF11-206ENST00000474828 CACNB2Q08289 660 aaPredicted RBP19.6■□□□□ 0.73
SCAF11-206ENST00000474828 BAATQ14032 418 aaPredicted RBP19.6■□□□□ 0.73
SCAF11-206ENST00000474828 USH1GQ495M9 461 aa19.6■□□□□ 0.73
SCAF11-206ENST00000474828 HOMER1Q86YM7 354 aa19.6■□□□□ 0.73
SCAF11-206ENST00000474828 MCF2L2Q86YR7 1114 aa19.6■□□□□ 0.73
SCAF11-206ENST00000474828 PLXNA1Q9UIW2 1896 aa19.6■□□□□ 0.73
SCAF11-206ENST00000474828 RPTORQ8N122 1335 aa19.59■□□□□ 0.73
SCAF11-206ENST00000474828 POTEB2H3BUK9 544 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms