RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 CCDC144CPQ8IYA2 1237 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 IGDCC4Q8TDY8 1250 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 NUP133Q8WUM0 1156 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 CLEC4DQ8WXI8 215 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 MYL10Q9BUA6 226 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 JMJD4Q9H9V9 463 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 MAD2L2Q9UI95 211 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 SYNGAP1Q96PV0 1343 aa18.67■□□□□ 0.58
ITGB1-210ENST00000474568 H0YGN5 161 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 EVI5O60447 810 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 ACVR2BQ13705 512 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 GRM4Q14833 912 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 MAMDC4Q6UXC1 1216 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 NFXL1Q6ZNB6 911 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 CATIPQ7Z7H3 387 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 RAB11FIP4Q86YS3 637 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
ITGB1-210ENST00000474568 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 ASTN1O14525 1302 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 WDR19Q8NEZ3 1342 aa18.66■□□□□ 0.58
ITGB1-210ENST00000474568 ZNFX1Q9P2E3 1918 aaKnown RBP18.65■□□□□ 0.58
ITGB1-210ENST00000474568 SH2B2O14492 632 aaPredicted RBP18.65■□□□□ 0.58
ITGB1-210ENST00000474568 PGK1P00558 417 aa18.65■□□□□ 0.58
ITGB1-210ENST00000474568 RARBP10826 455 aa18.65■□□□□ 0.58
ITGB1-210ENST00000474568 AKR1A1P14550 325 aa18.65■□□□□ 0.58
ITGB1-210ENST00000474568 MCM5P33992 734 aa18.65■□□□□ 0.58
ITGB1-210ENST00000474568 RNF20Q5VTR2 975 aa18.65■□□□□ 0.58
ITGB1-210ENST00000474568 EEPD1Q7L9B9 569 aa18.65■□□□□ 0.58
ITGB1-210ENST00000474568 C7orf61Q8IZ16 206 aa18.65■□□□□ 0.58
ITGB1-210ENST00000474568 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
ITGB1-210ENST00000474568 SENP6Q9GZR1 1112 aaPredicted RBP18.65■□□□□ 0.58
ITGB1-210ENST00000474568 XPNPEP3Q9NQH7 507 aa18.65■□□□□ 0.58
ITGB1-210ENST00000474568 PALM3A6NDB9 673 aaPredicted RBP18.64■□□□□ 0.57
ITGB1-210ENST00000474568 ATN1P54259 1190 aaPredicted RBP18.64■□□□□ 0.57
ITGB1-210ENST00000474568 SLC35G1Q2M3R5 365 aa18.64■□□□□ 0.57
ITGB1-210ENST00000474568 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
ITGB1-210ENST00000474568 RNF207Q6ZRF8 634 aa18.64■□□□□ 0.57
ITGB1-210ENST00000474568 FBXO11Q86XK2 927 aa18.64■□□□□ 0.57
ITGB1-210ENST00000474568 HOMER1Q86YM7 354 aa18.64■□□□□ 0.57
ITGB1-210ENST00000474568 RASEFQ8IZ41 740 aa18.64■□□□□ 0.57
ITGB1-210ENST00000474568 ARRDC4Q8NCT1 418 aa18.64■□□□□ 0.57
ITGB1-210ENST00000474568 TCEANC2Q96MN5 208 aa18.64■□□□□ 0.57
ITGB1-210ENST00000474568 FAM184BQ9ULE4 1060 aa18.64■□□□□ 0.57
ITGB1-210ENST00000474568 PLXNA1Q9UIW2 1896 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 CCDC69A6NI79 296 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 ASB14A6NK59 587 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 KBTBD13C9JR72 458 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 DNM1LO00429 736 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 COL6A1P12109 1028 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 RXRAP19793 462 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 TROAPQ12815 778 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 LRRC41Q15345 812 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 FBXO16Q8IX29 292 aaPredicted RBP18.63■□□□□ 0.57
ITGB1-210ENST00000474568 ZNF654Q8IZM8 581 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 TBC1D5Q92609 795 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 ABHD16BQ9H3Z7 469 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 PCDH10Q9P2E7 1040 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 PNMA2Q9UL42 364 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 NR2E3Q9Y5X4 410 aa18.63■□□□□ 0.57
ITGB1-210ENST00000474568 ADCY6O43306 1168 aa18.62■□□□□ 0.57
ITGB1-210ENST00000474568 RPS6P62753 249 aaKnown RBP18.62■□□□□ 0.57
ITGB1-210ENST00000474568 IRX5P78411 483 aaPredicted RBP18.62■□□□□ 0.57
ITGB1-210ENST00000474568 LRRC26Q2I0M4 334 aa18.62■□□□□ 0.57
ITGB1-210ENST00000474568 ADCK5Q3MIX3 580 aa18.62■□□□□ 0.57
ITGB1-210ENST00000474568 CCDC144BQ3MJ40 725 aa18.62■□□□□ 0.57
ITGB1-210ENST00000474568 FERMT2Q96AC1 680 aa18.62■□□□□ 0.57
ITGB1-210ENST00000474568 TMEM87BQ96K49 555 aa18.62■□□□□ 0.57
ITGB1-210ENST00000474568 NEK1Q96PY6 1258 aa18.62■□□□□ 0.57
ITGB1-210ENST00000474568 PIGSQ96S52 555 aa18.62■□□□□ 0.57
ITGB1-210ENST00000474568 ZMYND8Q9ULU4 1186 aaPredicted RBP18.62■□□□□ 0.57
ITGB1-210ENST00000474568 ABCB11O95342 1321 aa18.62■□□□□ 0.57
ITGB1-210ENST00000474568 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.61■□□□□ 0.57
ITGB1-210ENST00000474568 PPP1R11O60927 126 aaPredicted RBP18.61■□□□□ 0.57
ITGB1-210ENST00000474568 PTGS1P23219 599 aa18.61■□□□□ 0.57
ITGB1-210ENST00000474568 ADCYAP1R1P41586 468 aa18.61■□□□□ 0.57
ITGB1-210ENST00000474568 ALDH5A1P51649 535 aaPredicted RBP18.61■□□□□ 0.57
ITGB1-210ENST00000474568 NOL8Q76FK4 1167 aaKnown RBP18.61■□□□□ 0.57
ITGB1-210ENST00000474568 CTCFLQ8NI51 663 aaPredicted RBP18.61■□□□□ 0.57
ITGB1-210ENST00000474568 KATNBL1Q9H079 304 aa18.61■□□□□ 0.57
ITGB1-210ENST00000474568 SMCHD1A6NHR9 2005 aa18.61■□□□□ 0.57
ITGB1-210ENST00000474568 SYNRGQ9UMZ2 1314 aa18.6■□□□□ 0.57
ITGB1-210ENST00000474568 ZBTB5O15062 677 aa18.6■□□□□ 0.57
ITGB1-210ENST00000474568 CYTH3O43739 400 aa18.6■□□□□ 0.57
ITGB1-210ENST00000474568 DDAH1O94760 285 aa18.6■□□□□ 0.57
ITGB1-210ENST00000474568 CPA1P15085 419 aa18.6■□□□□ 0.57
ITGB1-210ENST00000474568 SYN1P17600 705 aa18.6■□□□□ 0.57
ITGB1-210ENST00000474568 RNF180Q86T96 592 aa18.6■□□□□ 0.57
ITGB1-210ENST00000474568 AMNQ9BXJ7 453 aa18.6■□□□□ 0.57
ITGB1-210ENST00000474568 PDGFCQ9NRA1 345 aa18.6■□□□□ 0.57
ITGB1-210ENST00000474568 ADD3Q9UEY8 706 aaKnown RBP18.6■□□□□ 0.57
ITGB1-210ENST00000474568 MRPL11Q9Y3B7 192 aaKnown RBP18.6■□□□□ 0.57
ITGB1-210ENST00000474568 MYADML2A6NDP7 307 aa18.59■□□□□ 0.57
ITGB1-210ENST00000474568 CMTR1Q8N1G2 835 aaKnown RBP18.59■□□□□ 0.57
ITGB1-210ENST00000474568 MTMR8Q96EF0 704 aa18.59■□□□□ 0.57
ITGB1-210ENST00000474568 FRMPD3Q5JV73 1810 aa18.58■□□□□ 0.57
ITGB1-210ENST00000474568 ADAMTS4O75173 837 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 DUSP11O75319 330 aaKnown RBP18.58■□□□□ 0.56
ITGB1-210ENST00000474568 PLEKHA8P1O95397 391 aa18.58■□□□□ 0.56
ITGB1-210ENST00000474568 CFBP00751 764 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms