RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CANXP27824 592 aaKnown RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 DNAJA1P31689 397 aaKnown RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 SOX10P56693 466 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 ORC1Q13415 861 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 MRPL58Q14197 206 aaKnown RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 KIF4BQ2VIQ3 1234 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 FAM177A1Q8N128 213 aaPredicted RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 GJD3Q8N144 294 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 FBF1Q8TES7 1133 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 ISL2Q96A47 359 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 ALKBH8Q96BT7 664 aaKnown RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 FAM122AQ96E09 287 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 HSPA12BQ96MM6 686 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 SETDB2Q96T68 719 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 FAM129BQ96TA1 746 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 TGIF2Q9GZN2 237 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 XYLT2Q9H1B5 865 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 ZNF576Q9H609 170 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 METTL5Q9NRN9 209 aaKnown RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 PAPPAQ13219 1627 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 NRXN3Q9Y4C0 1643 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 CASP8AP2Q9UKL3 1982 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 PLEKHG2Q9H7P9 1386 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 QSER1Q2KHR3 1735 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 OVOS2A0A0G2JMS6 1433 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 OVOS2A0A0J9YW53 1432 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 HFM1A2PYH4 1435 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 OVOS2Q6IE36 1432 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 DUOX2Q9NRD8 1548 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 ARHGEF5Q12774 1597 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 SMARCA5O60264 1052 aaPredicted RBP3.35□□□□□ -1.87
CALD1-216ENST00000473714 ZNF862O60290 1169 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 SEMA7AO75326 666 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
CALD1-216ENST00000473714 HS2ST1Q7LGA3 356 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 GALNT12Q8IXK2 581 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 ZNF654Q8IZM8 581 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 CRELD1Q96HD1 420 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 DNAJC2Q99543 621 aaKnown RBP3.35□□□□□ -1.87
CALD1-216ENST00000473714 FOXQ1Q9C009 403 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 DNAJC25Q9H1X3 360 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 SEMA3GQ9NS98 782 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 KRT82Q9NSB4 513 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 SLAMF8Q9P0V8 285 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 GGT7Q9UJ14 662 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 MYRFQ9Y2G1 1151 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 KCTD3Q9Y597 815 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 PCDHGC5Q9Y5F6 944 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 AK5Q9Y6K8 562 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 TNRC6CQ9HCJ0 1690 aaKnown RBP3.35□□□□□ -1.87
CALD1-216ENST00000473714 TECPR2O15040 1411 aa3.35□□□□□ -1.87
CALD1-216ENST00000473714 KCPQ6ZWJ8 1503 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 PHRF1Q9P1Y6 1649 aaKnown RBP3.34□□□□□ -1.87
CALD1-216ENST00000473714 RBAK-RBAKDNI3L0D1 243 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 OVOL3O00110 214 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 GIPC1O14908 333 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 PPM1GO15355 546 aaPredicted RBP3.34□□□□□ -1.87
CALD1-216ENST00000473714 NEFMP07197 916 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 ZNF157P51786 506 aaPredicted RBP3.34□□□□□ -1.87
CALD1-216ENST00000473714 FANCCQ00597 558 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 ARID5AQ03989 594 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 ZNF827Q17R98 1081 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 CDKAL1Q5VV42 579 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 KRT28Q7Z3Y7 464 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 USP48Q86UV5 1035 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 RNF214Q8ND24 703 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 PUS7Q96PZ0 661 aaKnown RBP3.34□□□□□ -1.87
CALD1-216ENST00000473714 GPR20Q99678 358 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 ACBD3Q9H3P7 528 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 PRDM5Q9NQX1 630 aaPredicted RBP3.34□□□□□ -1.87
CALD1-216ENST00000473714 RNF19AQ9NV58 838 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 IGSF1Q8N6C5 1336 aa3.34□□□□□ -1.87
CALD1-216ENST00000473714 BRD4O60885 1362 aaPredicted RBP3.34□□□□□ -1.88
CALD1-216ENST00000473714 METP08581 1390 aa3.34□□□□□ -1.88
CALD1-216ENST00000473714 BCL9O00512 1426 aa3.34□□□□□ -1.88
CALD1-216ENST00000473714 TNS3Q68CZ2 1445 aa3.34□□□□□ -1.88
CALD1-216ENST00000473714 CCDC141Q6ZP82 1450 aa3.34□□□□□ -1.88
CALD1-216ENST00000473714 SZT2Q5T011 3432 aa3.34□□□□□ -1.88
CALD1-216ENST00000473714 PKD1L3Q7Z443 1732 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 FMN2Q9NZ56 1722 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 PARP4Q9UKK3 1724 aaKnown RBP3.33□□□□□ -1.88
CALD1-216ENST00000473714 RGPD8O14715 1765 aaPredicted RBP3.33□□□□□ -1.88
CALD1-216ENST00000473714 AKAP8O43823 692 aaKnown RBP3.33□□□□□ -1.88
CALD1-216ENST00000473714 PEX10O60683 326 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 VEGFAP15692 232 aaPredicted RBP3.33□□□□□ -1.88
CALD1-216ENST00000473714 NCLP19338 710 aaKnown RBP3.33□□□□□ -1.88
CALD1-216ENST00000473714 ITPKAP23677 461 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 ERVFC1P60507 584 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 PLP2Q04941 152 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 FAAP100Q0VG06 881 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 TAF1CQ15572 869 aaPredicted RBP3.33□□□□□ -1.88
CALD1-216ENST00000473714 ZNF605Q86T29 641 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 IRF2BP1Q8IU81 584 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 ZDHHC14Q8IZN3 488 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 DHX38Q92620 1227 aaKnown RBP3.33□□□□□ -1.88
CALD1-216ENST00000473714 CCDC74AQ96AQ1 378 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 ABCB6Q9NP58 842 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 NPHS2Q9NP85 383 aa3.33□□□□□ -1.88
CALD1-216ENST00000473714 MAPK8IP1Q9UQF2 711 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms