RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 EFCAB13Q8IY85 973 aa15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 FNBP4Q8N3X1 1017 aaPredicted RBP15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 PURBQ96QR8 312 aaKnown RBP15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 NOC4LQ9BVI4 516 aaKnown RBP15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 TMEM60Q9H2L4 133 aa15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 KAT14Q9H8E8 782 aa15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 ITGB4P16144 1822 aa15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 ORC4O43929 436 aa15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 USO1O60763 962 aaKnown RBP15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 TACC1O75410 805 aa15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 SMCR8Q8TEV9 937 aaPredicted RBP15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 AENQ8WTP8 325 aaKnown RBP15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 P2RX5Q93086 422 aa15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 DRC1Q96MC2 740 aa15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 SNX12Q9UMY4 172 aa15.89■□□□□ 0.13
NHLRC3-204ENST00000473371 BICDL2A1A5D9 508 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 CCNE1P24864 410 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 CCDC178Q5BJE1 867 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 KRT26Q7Z3Y9 468 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 TRIM58Q8NG06 486 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 KBTBD4Q9NVX7 518 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 SHOX2O60902 331 aaPredicted RBP15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 PDE4DQ08499 809 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 FKBP15Q5T1M5 1219 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 MMGT1Q8N4V1 131 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 JRKLQ9Y4A0 524 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 BCL9O00512 1426 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 ZNF804BA4D1E1 1349 aa15.88■□□□□ 0.13
NHLRC3-204ENST00000473371 MATR3P43243 847 aaKnown RBP eCLIP15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 EZH2Q15910 746 aaKnown RBP15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 ANKRD40Q6AI12 368 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 CCSER1Q9C0I3 900 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 WTIPA6NIX2 430 aaPredicted RBP15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 IRAK1P51617 712 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 PPFIA1Q13136 1202 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 INF2Q27J81 1249 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 CAVIN4Q5BKX8 364 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 ICE2Q659A1 982 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 CREG2Q8IUH2 290 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 LRRC1Q9BTT6 524 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 FAM107BQ9H098 131 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 CYP2D6P10635 497 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 CCT5P48643 541 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 MLXIPQ9HAP2 919 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 WNK3Q9BYP7 1800 aa15.87■□□□□ 0.13
NHLRC3-204ENST00000473371 COL1A1P02452 1464 aaPredicted RBP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 A0A087WUV0 522 aaPredicted RBP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 ZNF263O14978 683 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 PLEKP08567 350 aaPredicted RBP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 CDK17Q00537 523 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 SEMA3FQ13275 785 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 PARP10Q53GL7 1025 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 TYW1BQ6NUM6 668 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 ZNF384Q8TF68 577 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 HDAC7Q8WUI4 952 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 RRP36Q96EU6 259 aaKnown RBP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 IFIH1Q9BYX4 1025 aaKnown RBP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 SH3GLB2Q9NR46 395 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 DMGDHQ9UI17 866 aaKnown RBP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 CAPN6Q9Y6Q1 641 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 GTF2A1P52655 376 aaPredicted RBP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 ASIC1P78348 528 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 MRPS25P82663 173 aaKnown RBP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 TADA2BQ86TJ2 420 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 MICALL1Q8N3F8 863 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 CAPS2Q9BXY5 557 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 CRNKL1Q9BZJ0 848 aaKnown RBP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 DEF6Q9H4E7 631 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 NIP7Q9Y221 180 aaKnown RBP eCLIP15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 CACNA1SQ13698 1873 aa15.86■□□□□ 0.13
NHLRC3-204ENST00000473371 A0A1W2PQJ5 194 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 EBAG9O00559 213 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 MOCS3O95396 460 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 PLCG1P19174 1290 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 CCDC181Q5TID7 509 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 CABP7Q86V35 215 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 SPATA4Q8NEY3 305 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 LRRC15Q8TF66 581 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 DCP1AQ9NPI6 582 aaPredicted RBP15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 PCDHA6Q9UN73 950 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 PCDHA8Q9Y5H6 950 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 PCDHA13Q9Y5I0 950 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 GOLGA8KD6RF30 607 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 SLC7A5Q01650 507 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 STK4Q13043 487 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 MIIPQ5JXC2 388 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 C2CD5Q86YS7 1000 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 ERGIC2Q96RQ1 377 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 RABEP2Q9H5N1 569 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 TCP11L1Q9NUJ3 509 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 OPA1O60313 960 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 SLC4A8Q2Y0W8 1093 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 FIGNQ5HY92 759 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 STAG2Q8N3U4 1231 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 RUFY1Q96T51 708 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 PSMB7Q99436 277 aa15.85■□□□□ 0.13
NHLRC3-204ENST00000473371 CUEDC2Q9H467 287 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms