RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 FMNL1O95466 1100 aaPredicted RBP14.88□□□□□ -0.03
SEC16A-209ENST00000472305 NOM1Q5C9Z4 860 aaKnown RBP14.88□□□□□ -0.03
SEC16A-209ENST00000472305 WWC2Q6AWC2 1192 aa14.88□□□□□ -0.03
SEC16A-209ENST00000472305 TYW1BQ6NUM6 668 aa14.88□□□□□ -0.03
SEC16A-209ENST00000472305 GPR142Q7Z601 462 aa14.88□□□□□ -0.03
SEC16A-209ENST00000472305 DDX11Q96FC9 970 aa14.88□□□□□ -0.03
SEC16A-209ENST00000472305 AMNQ9BXJ7 453 aa14.88□□□□□ -0.03
SEC16A-209ENST00000472305 SH2B1Q9NRF2 756 aaPredicted RBP14.88□□□□□ -0.03
SEC16A-209ENST00000472305 SMCHD1A6NHR9 2005 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 PTPDC1A2A3K4 754 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 NFIBO00712 420 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 OPLAHO14841 1288 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 SLC25A27O95847 323 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 MCM2P49736 904 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 CCNA1P78396 465 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 SSRP1Q08945 709 aaKnown RBP14.87□□□□□ -0.03
SEC16A-209ENST00000472305 PLEKHH3Q7Z736 793 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 SHCBP1Q8NEM2 672 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 SNX21Q969T3 373 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 RNF26Q9BY78 433 aaPredicted RBP14.87□□□□□ -0.03
SEC16A-209ENST00000472305 SEC63Q9UGP8 760 aaKnown RBP14.87□□□□□ -0.03
SEC16A-209ENST00000472305 GABRQQ9UN88 632 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 PCDHA1Q9Y5I3 950 aa14.87□□□□□ -0.03
SEC16A-209ENST00000472305 TNPO2O14787 897 aaKnown RBP14.86□□□□□ -0.03
SEC16A-209ENST00000472305 ADAMTS3O15072 1205 aa14.86□□□□□ -0.03
SEC16A-209ENST00000472305 PTPREP23469 700 aa14.86□□□□□ -0.03
SEC16A-209ENST00000472305 PFKFB3Q16875 520 aaPredicted RBP14.86□□□□□ -0.03
SEC16A-209ENST00000472305 HEATR3Q7Z4Q2 680 aa14.86□□□□□ -0.03
SEC16A-209ENST00000472305 CCAR1Q8IX12 1150 aaKnown RBP14.86□□□□□ -0.03
SEC16A-209ENST00000472305 IL27Q8NEV9 243 aa14.86□□□□□ -0.03
SEC16A-209ENST00000472305 SMARCC2Q8TAQ2 1214 aa14.86□□□□□ -0.03
SEC16A-209ENST00000472305 PURBQ96QR8 312 aaKnown RBP14.86□□□□□ -0.03
SEC16A-209ENST00000472305 MROH8Q9H579 483 aa14.86□□□□□ -0.03
SEC16A-209ENST00000472305 GJD2Q9UKL4 321 aa14.86□□□□□ -0.03
SEC16A-209ENST00000472305 ABCB11O95342 1321 aa14.86□□□□□ -0.03
SEC16A-209ENST00000472305 STXBP3O00186 592 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 COBLO75128 1261 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 PGK2P07205 417 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 SCG2P13521 617 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 MAPK4P31152 587 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 FCGRTP55899 365 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 TKFCQ3LXA3 575 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 CPLX2Q6PUV4 134 aaKnown RBP14.85□□□□□ -0.03
SEC16A-209ENST00000472305 CHST13Q8NET6 341 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 ERO1AQ96HE7 468 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 MMP19Q99542 508 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 ACAD9Q9H845 621 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 CWC22Q9HCG8 908 aaKnown RBP14.85□□□□□ -0.03
SEC16A-209ENST00000472305 A1CFQ9NQ94 594 aaKnown RBP14.85□□□□□ -0.03
SEC16A-209ENST00000472305 GJB4Q9NTQ9 266 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 FOXD4L1Q9NU39 408 aa14.85□□□□□ -0.03
SEC16A-209ENST00000472305 ORC3Q9UBD5 711 aaPredicted RBP14.85□□□□□ -0.03
SEC16A-209ENST00000472305 K7ELQ4 463 aaPredicted RBP14.84□□□□□ -0.03
SEC16A-209ENST00000472305 FOSBP53539 338 aa14.84□□□□□ -0.03
SEC16A-209ENST00000472305 AKAP17AQ02040 695 aaKnown RBP14.84□□□□□ -0.03
SEC16A-209ENST00000472305 PRKCZQ05513 592 aa14.84□□□□□ -0.03
SEC16A-209ENST00000472305 CUL4AQ13619 759 aa14.84□□□□□ -0.03
SEC16A-209ENST00000472305 KIF22Q14807 665 aa14.84□□□□□ -0.03
SEC16A-209ENST00000472305 MORN1Q5T089 497 aa14.84□□□□□ -0.03
SEC16A-209ENST00000472305 NSMFQ6X4W1 530 aa14.84□□□□□ -0.03
SEC16A-209ENST00000472305 SLC30A10Q6XR72 485 aa14.84□□□□□ -0.03
SEC16A-209ENST00000472305 VPS54Q9P1Q0 977 aa14.84□□□□□ -0.03
SEC16A-209ENST00000472305 MRPL11Q9Y3B7 192 aaKnown RBP14.84□□□□□ -0.03
SEC16A-209ENST00000472305 TRIM17Q9Y577 477 aa14.84□□□□□ -0.03
SEC16A-209ENST00000472305 CDKL5O76039 1030 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 DEXIO95424 95 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 CYP2B6P20813 491 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 ADORA2AP29274 412 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 COPB2P35606 906 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 BAATQ14032 418 aaPredicted RBP14.83□□□□□ -0.04
SEC16A-209ENST00000472305 GRB14Q14449 540 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 OTOP1Q7RTM1 612 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 HSCBQ8IWL3 235 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 TRIM22Q8IYM9 498 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 ANKRD35Q8N283 1001 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 NPLOC4Q8TAT6 608 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 USP6NLQ92738 828 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 LLPHQ9BRT6 129 aaKnown RBP14.83□□□□□ -0.04
SEC16A-209ENST00000472305 BARHL2Q9NY43 387 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 COL20A1Q9P218 1284 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 FBXO40Q9UH90 709 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 DDX49Q9Y6V7 483 aaKnown RBP14.83□□□□□ -0.04
SEC16A-209ENST00000472305 STK36Q9NRP7 1315 aa14.83□□□□□ -0.04
SEC16A-209ENST00000472305 SLC15A5A6NIM6 579 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 FCER1AP12319 257 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 CALML3P27482 149 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 HOXA13P31271 388 aaPredicted RBP14.82□□□□□ -0.04
SEC16A-209ENST00000472305 FLT3LGP49771 235 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 NAPAP54920 295 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 RPS6P62753 249 aaKnown RBP14.82□□□□□ -0.04
SEC16A-209ENST00000472305 CNTN2Q02246 1040 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 KCTD2Q14681 263 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 USP17L6PQ6QN14 398 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
SEC16A-209ENST00000472305 SYTL5Q8TDW5 730 aaPredicted RBP14.82□□□□□ -0.04
SEC16A-209ENST00000472305 FGD4Q96M96 766 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 ALG1Q9BT22 464 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 TSHZ2Q9NRE2 1034 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 CYP39A1Q9NYL5 469 aa14.82□□□□□ -0.04
SEC16A-209ENST00000472305 SRRDQ9UH36 339 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms