RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 NFIBO00712 420 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 PSMC4P43686 418 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 LBX1P52954 281 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 CUL4AQ13619 759 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 PFKFB3Q16875 520 aaPredicted RBP16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 WDR78Q5VTH9 848 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 GPR142Q7Z601 462 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 SMARCC2Q8TAQ2 1214 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 TRIM47Q96LD4 638 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 PCDHA1Q9Y5I3 950 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 LCTP09848 1927 aa16.94■□□□□ 0.3
SMARCD3-207ENST00000472103 STXBP3O00186 592 aa16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 ADAMTS3O15072 1205 aa16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 SLC25A27O95847 323 aa16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 SCG2P13521 617 aa16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 CCNA1P78396 465 aa16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 CPLX2Q6PUV4 134 aaKnown RBP16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 TSHZ2Q9NRE2 1034 aa16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 GJB4Q9NTQ9 266 aa16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 ORC3Q9UBD5 711 aaPredicted RBP16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 ABCB11O95342 1321 aa16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 STK36Q9NRP7 1315 aa16.93■□□□□ 0.3
SMARCD3-207ENST00000472103 TKFCQ3LXA3 575 aa16.92■□□□□ 0.3
SMARCD3-207ENST00000472103 HEATR3Q7Z4Q2 680 aa16.92■□□□□ 0.3
SMARCD3-207ENST00000472103 PLEKHH3Q7Z736 793 aa16.92■□□□□ 0.3
SMARCD3-207ENST00000472103 HSCBQ8IWL3 235 aa16.92■□□□□ 0.3
SMARCD3-207ENST00000472103 CHST13Q8NET6 341 aa16.92■□□□□ 0.3
SMARCD3-207ENST00000472103 MROH8Q9H579 483 aa16.92■□□□□ 0.3
SMARCD3-207ENST00000472103 ACAD9Q9H845 621 aa16.92■□□□□ 0.3
SMARCD3-207ENST00000472103 GABRQQ9UN88 632 aa16.92■□□□□ 0.3
SMARCD3-207ENST00000472103 CDKL5O76039 1030 aa16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 DEXIO95424 95 aa16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 PTPREP23469 700 aa16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 MAPK4P31152 587 aa16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 CTCFP49711 727 aaPredicted RBP16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 FOSBP53539 338 aa16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 AKAP17AQ02040 695 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 TRIM22Q8IYM9 498 aa16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 PURBQ96QR8 312 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 LLPHQ9BRT6 129 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 A1CFQ9NQ94 594 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 BARHL2Q9NY43 387 aa16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 VPS54Q9P1Q0 977 aa16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 RBBP6Q7Z6E9 1792 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-207ENST00000472103 TNPO2O14787 897 aaKnown RBP16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 COBLO75128 1261 aa16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 FCGRTP55899 365 aa16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 MORN1Q5T089 497 aa16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 NSMFQ6X4W1 530 aa16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 CCAR1Q8IX12 1150 aaKnown RBP16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 ERO1AQ96HE7 468 aa16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 MMP19Q99542 508 aa16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 GJD2Q9UKL4 321 aa16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 MRPL11Q9Y3B7 192 aaKnown RBP16.9■□□□□ 0.3
SMARCD3-207ENST00000472103 ZNF236Q9UL36 1845 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 PGK2P07205 417 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 COPB2P35606 906 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 NAPAP54920 295 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 BAATQ14032 418 aaPredicted RBP16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 GRB14Q14449 540 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 KIF22Q14807 665 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 NPLOC4Q8TAT6 608 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 USP6NLQ92738 828 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 FGD4Q96M96 766 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 ALG1Q9BT22 464 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 COL20A1Q9P218 1284 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 RBM27Q9P2N5 1060 aaKnown RBP16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 FBXO40Q9UH90 709 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 PNMA2Q9UL42 364 aa16.89■□□□□ 0.29
SMARCD3-207ENST00000472103 PLXNA1Q9UIW2 1896 aa16.88■□□□□ 0.29
SMARCD3-207ENST00000472103 GJB2P29033 226 aa16.88■□□□□ 0.29
SMARCD3-207ENST00000472103 ADORA2AP29274 412 aa16.88■□□□□ 0.29
SMARCD3-207ENST00000472103 PRKCZQ05513 592 aa16.88■□□□□ 0.29
SMARCD3-207ENST00000472103 CWC22Q9HCG8 908 aaKnown RBP16.88■□□□□ 0.29
SMARCD3-207ENST00000472103 CYP39A1Q9NYL5 469 aa16.88■□□□□ 0.29
SMARCD3-207ENST00000472103 KCNJ14Q9UNX9 436 aa16.88■□□□□ 0.29
SMARCD3-207ENST00000472103 PCNTO95613 3336 aa16.88■□□□□ 0.29
SMARCD3-207ENST00000472103 DNAJC25-GNG10A0A024R161 153 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 SLC15A5A6NIM6 579 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 hCG_1984214I3L0E3 225 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 MEIS2O14770 477 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 CFBP00751 764 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 FCER1AP12319 257 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 CYP2B6P20813 491 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 HOXA13P31271 388 aaPredicted RBP16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 HSD17B4P51659 736 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 RPS6P62753 249 aaKnown RBP16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 CNTN2Q02246 1040 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 GHRHRQ02643 423 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 NPY5RQ15761 445 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 UBE2SQ16763 222 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 RNF207Q6ZRF8 634 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 OTOP1Q7RTM1 612 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 ANKRD35Q8N283 1001 aa16.87■□□□□ 0.29
SMARCD3-207ENST00000472103 ZNF713Q8N859 430 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms