RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.36
SSR4-208ENST00000471880 ARMCX2Q7L311 632 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 CATIPQ7Z7H3 387 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 ADGRF4Q8IZF3 695 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 FGD4Q96M96 766 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 XPNPEP3Q9NQH7 507 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 PNMA2Q9UL42 364 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 SYNGAP1Q96PV0 1343 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 KLRF2D3W0D1 207 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 PRC1O43663 620 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 SNAI1O95863 264 aaPredicted RBP17.26■□□□□ 0.35
SSR4-208ENST00000471880 ATN1P54259 1190 aaPredicted RBP17.26■□□□□ 0.35
SSR4-208ENST00000471880 EEPD1Q7L9B9 569 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 ZNF467Q7Z7K2 595 aaPredicted RBP17.26■□□□□ 0.35
SSR4-208ENST00000471880 STAG2Q8N3U4 1231 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 MSL3Q8N5Y2 521 aaKnown RBP17.26■□□□□ 0.35
SSR4-208ENST00000471880 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 PURBQ96QR8 312 aaKnown RBP17.26■□□□□ 0.35
SSR4-208ENST00000471880 SENP2Q9HC62 589 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 CYP39A1Q9NYL5 469 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 NRBP1Q9UHY1 535 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 FAM184BQ9ULE4 1060 aa17.26■□□□□ 0.35
SSR4-208ENST00000471880 BAZ2BQ9UIF8 2168 aaKnown RBP17.26■□□□□ 0.35
SSR4-208ENST00000471880 SOWAHBA6NEL2 793 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 DNM1LO00429 736 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 PGK1P00558 417 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 ZNF865P0CJ78 1059 aaPredicted RBP17.25■□□□□ 0.35
SSR4-208ENST00000471880 COL6A1P12109 1028 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 MCM5P33992 734 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 ACVR2BQ13705 512 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 SLC30A10Q6XR72 485 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 RNF207Q6ZRF8 634 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 HOMER1Q86YM7 354 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 MB21D2Q8IYB1 491 aaPredicted RBP17.25■□□□□ 0.35
SSR4-208ENST00000471880 FAM133AQ8N9E0 248 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 PIBF1Q8WXW3 757 aa17.25■□□□□ 0.35
SSR4-208ENST00000471880 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
SSR4-208ENST00000471880 CCDC69A6NI79 296 aa17.24■□□□□ 0.35
SSR4-208ENST00000471880 ASB14A6NK59 587 aa17.24■□□□□ 0.35
SSR4-208ENST00000471880 ANTXR2P58335 489 aa17.24■□□□□ 0.35
SSR4-208ENST00000471880 QRICH1Q2TAL8 776 aa17.24■□□□□ 0.35
SSR4-208ENST00000471880 MAMDC4Q6UXC1 1216 aa17.24■□□□□ 0.35
SSR4-208ENST00000471880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.24■□□□□ 0.35
SSR4-208ENST00000471880 RNF180Q86T96 592 aa17.24■□□□□ 0.35
SSR4-208ENST00000471880 FBXO11Q86XK2 927 aa17.24■□□□□ 0.35
SSR4-208ENST00000471880 LRRC2Q9BYS8 371 aa17.24■□□□□ 0.35
SSR4-208ENST00000471880 ABHD16BQ9H3Z7 469 aa17.24■□□□□ 0.35
SSR4-208ENST00000471880 ADD3Q9UEY8 706 aaKnown RBP17.24■□□□□ 0.35
SSR4-208ENST00000471880 ZMYND8Q9ULU4 1186 aaPredicted RBP17.24■□□□□ 0.35
SSR4-208ENST00000471880 WDR19Q8NEZ3 1342 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 SYN1P17600 705 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 ADCYAP1R1P41586 468 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 NECTIN1Q15223 517 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 LRRC41Q15345 812 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 CCDC144BQ3MJ40 725 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 JMJD4Q9H9V9 463 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 SPC25Q9HBM1 224 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
SSR4-208ENST00000471880 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
SSR4-208ENST00000471880 COLQQ9Y215 455 aaPredicted RBP17.23■□□□□ 0.35
SSR4-208ENST00000471880 ABCB11O95342 1321 aa17.22■□□□□ 0.35
SSR4-208ENST00000471880 GRM4Q14833 912 aa17.22■□□□□ 0.35
SSR4-208ENST00000471880 LRRC26Q2I0M4 334 aa17.22■□□□□ 0.35
SSR4-208ENST00000471880 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
SSR4-208ENST00000471880 RAB11FIP4Q86YS3 637 aa17.22■□□□□ 0.35
SSR4-208ENST00000471880 FBXO16Q8IX29 292 aaPredicted RBP17.22■□□□□ 0.35
SSR4-208ENST00000471880 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
SSR4-208ENST00000471880 CLEC4DQ8WXI8 215 aa17.22■□□□□ 0.35
SSR4-208ENST00000471880 MPHOSPH6Q99547 160 aaKnown RBP17.22■□□□□ 0.35
SSR4-208ENST00000471880 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
SSR4-208ENST00000471880 ASTN1O14525 1302 aa17.21■□□□□ 0.35
SSR4-208ENST00000471880 C6orf222P0C671 652 aaPredicted RBP17.21■□□□□ 0.35
SSR4-208ENST00000471880 RPS6P62753 249 aaKnown RBP17.21■□□□□ 0.35
SSR4-208ENST00000471880 PDE4DQ08499 809 aa17.21■□□□□ 0.35
SSR4-208ENST00000471880 ZNF654Q8IZM8 581 aa17.21■□□□□ 0.35
SSR4-208ENST00000471880 IGDCC4Q8TDY8 1250 aa17.21■□□□□ 0.35
SSR4-208ENST00000471880 VTI1AQ96AJ9 217 aa17.21■□□□□ 0.35
SSR4-208ENST00000471880 TMEM87BQ96K49 555 aa17.21■□□□□ 0.35
SSR4-208ENST00000471880 AMNQ9BXJ7 453 aa17.21■□□□□ 0.35
SSR4-208ENST00000471880 LY9Q9HBG7 655 aa17.21■□□□□ 0.35
SSR4-208ENST00000471880 NAP1L2Q9ULW6 460 aaPredicted RBP17.21■□□□□ 0.35
SSR4-208ENST00000471880 MRPL11Q9Y3B7 192 aaKnown RBP17.21■□□□□ 0.35
SSR4-208ENST00000471880 LTBP2Q14767 1821 aa17.21■□□□□ 0.35
SSR4-208ENST00000471880 SYNRGQ9UMZ2 1314 aa17.21■□□□□ 0.34
SSR4-208ENST00000471880 PALM3A6NDB9 673 aaPredicted RBP17.2■□□□□ 0.34
SSR4-208ENST00000471880 CFBP00751 764 aa17.2■□□□□ 0.34
SSR4-208ENST00000471880 RXRAP19793 462 aa17.2■□□□□ 0.34
SSR4-208ENST00000471880 KIF5BP33176 963 aa17.2■□□□□ 0.34
SSR4-208ENST00000471880 ALDH5A1P51649 535 aaPredicted RBP17.2■□□□□ 0.34
SSR4-208ENST00000471880 FGD1P98174 961 aa17.2■□□□□ 0.34
SSR4-208ENST00000471880 TNFAIP2Q03169 654 aa17.2■□□□□ 0.34
SSR4-208ENST00000471880 HABP4Q5JVS0 413 aaKnown RBP17.2■□□□□ 0.34
SSR4-208ENST00000471880 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
SSR4-208ENST00000471880 NEK1Q96PY6 1258 aa17.2■□□□□ 0.34
SSR4-208ENST00000471880 PIGSQ96S52 555 aa17.2■□□□□ 0.34
SSR4-208ENST00000471880 PRO3102Q9H379 93 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms