RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 ATL3Q6DD88 541 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 TNS4Q8IZW8 715 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 AIFM3Q96NN9 605 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 RIC8AQ9NPQ8 531 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 VPS54Q9P1Q0 977 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 ZNF214Q9UL59 606 aaPredicted RBP21.8■■□□□ 1.08
SNX4-203ENST00000471751 PIK3CDO00329 1044 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 PPFIA3O75145 1194 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 SLC25A27O95847 323 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 MAP2K1Q02750 393 aaPredicted RBP21.8■■□□□ 1.08
SNX4-203ENST00000471751 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.8■■□□□ 1.08
SNX4-203ENST00000471751 CUL5Q93034 780 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 ZIC5Q96T25 663 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 FBXO40Q9UH90 709 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 TSKSQ9UJT2 592 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 CCPG1Q9ULG6 757 aa21.8■■□□□ 1.08
SNX4-203ENST00000471751 A0A0G2JMZ2 1700 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 PCNTO95613 3336 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 VPS37CA5D8V6 355 aaPredicted RBP21.79■■□□□ 1.08
SNX4-203ENST00000471751 KRT2P35908 639 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 STAT3P40763 770 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 CTCFP49711 727 aaPredicted RBP21.79■■□□□ 1.08
SNX4-203ENST00000471751 LBX1P52954 281 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 IFNL1Q8IU54 200 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 RIOX2Q8IUF8 465 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 BLIDQ8IZY5 108 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 CHST13Q8NET6 341 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 PIBF1Q8WXW3 757 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 GPKOWQ92917 476 aaPredicted RBP eCLIP21.79■■□□□ 1.08
SNX4-203ENST00000471751 COA7Q96BR5 231 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 PTPN18Q99952 460 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 PSTPIP2Q9H939 334 aa21.79■■□□□ 1.08
SNX4-203ENST00000471751 F13A1P00488 732 aa21.78■■□□□ 1.08
SNX4-203ENST00000471751 FOSP01100 380 aaPredicted RBP21.78■■□□□ 1.08
SNX4-203ENST00000471751 ADCY7P51828 1080 aa21.78■■□□□ 1.08
SNX4-203ENST00000471751 KIF23Q02241 960 aaPredicted RBP21.78■■□□□ 1.08
SNX4-203ENST00000471751 TMEM132BQ14DG7 1078 aa21.78■■□□□ 1.08
SNX4-203ENST00000471751 DIS3L2Q8IYB7 885 aaKnown RBP21.78■■□□□ 1.08
SNX4-203ENST00000471751 SHCBP1Q8NEM2 672 aa21.78■■□□□ 1.08
SNX4-203ENST00000471751 BEGAINQ9BUH8 593 aa21.78■■□□□ 1.08
SNX4-203ENST00000471751 MORF4L1Q9UBU8 362 aa21.78■■□□□ 1.08
SNX4-203ENST00000471751 COL11A1P12107 1806 aaPredicted RBP21.77■■□□□ 1.08
SNX4-203ENST00000471751 M0R2N6 131 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 CAPN15O75808 1086 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 CCNA1P78396 465 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 AP3B2Q13367 1082 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 NPY5RQ15761 445 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 TYW1BQ6NUM6 668 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 CCDC174Q6PII3 467 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 CLEC17AQ6ZS10 378 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 FAM43AQ8N2R8 423 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 SMCR8Q8TEV9 937 aaPredicted RBP21.77■■□□□ 1.07
SNX4-203ENST00000471751 ZDHHC9Q9Y397 364 aa21.77■■□□□ 1.07
SNX4-203ENST00000471751 CLK2P49760 499 aaKnown RBP21.76■■□□□ 1.07
SNX4-203ENST00000471751 MKRN3Q13064 507 aaKnown RBP21.76■■□□□ 1.07
SNX4-203ENST00000471751 GNL2Q13823 731 aaKnown RBP21.76■■□□□ 1.07
SNX4-203ENST00000471751 NOSTRINQ8IVI9 506 aa21.76■■□□□ 1.07
SNX4-203ENST00000471751 SPATC1LQ9H0A9 340 aa21.76■■□□□ 1.07
SNX4-203ENST00000471751 RAVER2Q9HCJ3 691 aaKnown RBP21.76■■□□□ 1.07
SNX4-203ENST00000471751 RBPJLQ9UBG7 517 aa21.76■■□□□ 1.07
SNX4-203ENST00000471751 KCNJ14Q9UNX9 436 aa21.76■■□□□ 1.07
SNX4-203ENST00000471751 HSPA8P11142 646 aaKnown RBP21.75■■□□□ 1.07
SNX4-203ENST00000471751 TRAPPC10P48553 1259 aa21.75■■□□□ 1.07
SNX4-203ENST00000471751 KRT25Q7Z3Z0 450 aa21.75■■□□□ 1.07
SNX4-203ENST00000471751 CPXCR1Q8N123 301 aa21.75■■□□□ 1.07
SNX4-203ENST00000471751 REXO1Q8N1G1 1221 aaKnown RBP21.75■■□□□ 1.07
SNX4-203ENST00000471751 GPRC5AQ8NFJ5 357 aa21.75■■□□□ 1.07
SNX4-203ENST00000471751 SHISA4Q96DD7 197 aa21.75■■□□□ 1.07
SNX4-203ENST00000471751 AGBL1Q96MI9 1066 aa21.75■■□□□ 1.07
SNX4-203ENST00000471751 CFHR5Q9BXR6 569 aa21.75■■□□□ 1.07
SNX4-203ENST00000471751 MROH8Q9H579 483 aa21.75■■□□□ 1.07
SNX4-203ENST00000471751 SMCHD1A6NHR9 2005 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 BTBD18B2RXH4 712 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 RESTQ13127 1097 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 FAM110CQ1W6H9 321 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 USH1GQ495M9 461 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 RILPL1Q5EBL4 403 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 MCTP1Q6DN14 999 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 SNRNP48Q6IEG0 339 aaKnown RBP21.74■■□□□ 1.07
SNX4-203ENST00000471751 TNFRSF25Q93038 417 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 TRERF1Q96PN7 1200 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 ACAD9Q9H845 621 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 ZFYVE28Q9HCC9 887 aa21.74■■□□□ 1.07
SNX4-203ENST00000471751 GCOM1H8Y6P7 765 aaPredicted RBP21.73■■□□□ 1.07
SNX4-203ENST00000471751 IGF2BP3O00425 579 aaKnown RBP eCLIP21.73■■□□□ 1.07
SNX4-203ENST00000471751 DTNBO60941 627 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 POLR2MP0CAP2 368 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 SNAP25P60880 206 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 GUCY1B3Q02153 619 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 PKP1Q13835 747 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 CLEC4DQ8WXI8 215 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 GJB4Q9NTQ9 266 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 BTBD7Q9P203 1132 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 PCDHA6Q9UN73 950 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 PCDHA8Q9Y5H6 950 aa21.73■■□□□ 1.07
SNX4-203ENST00000471751 MEIS2O14770 477 aa21.72■■□□□ 1.07
SNX4-203ENST00000471751 CA12O43570 354 aa21.72■■□□□ 1.07
SNX4-203ENST00000471751 TLR2O60603 784 aa21.72■■□□□ 1.07
SNX4-203ENST00000471751 CNMDO75829 334 aa21.72■■□□□ 1.07
SNX4-203ENST00000471751 ALAS1P13196 640 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms