RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 RASSF7Q02833 373 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
NUP50-214ENST00000469163 KRT32Q14532 448 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 SPECC1Q5M775 1068 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 DLK2Q6UY11 383 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
NUP50-214ENST00000469163 TRIM7Q9C029 511 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 HELLSQ9NRZ9 838 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 ZSWIM5Q9P217 1185 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 SALL3Q9BXA9 1300 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 STX6O43752 255 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 BBOX1O75936 387 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 NPR1P16066 1061 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
NUP50-214ENST00000469163 TRIM11Q96F44 468 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 STRBPQ96SI9 672 aaKnown RBP11.06□□□□□ -0.64
NUP50-214ENST00000469163 OSBPL9Q96SU4 736 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 NACA2Q9H009 215 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 TNMDQ9H2S6 317 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 UBAP1Q9NZ09 502 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 RABL2BQ9UNT1 228 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 FRMPD2Q68DX3 1309 aaPredicted RBP11.05□□□□□ -0.64
NUP50-214ENST00000469163 A0A1B0GVG6 124 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 PTPDC1A2A3K4 754 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 SLC3A2P08195 630 aaKnown RBP11.05□□□□□ -0.64
NUP50-214ENST00000469163 PPARAQ07869 468 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 NECTIN1Q15223 517 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 CWF19L1Q69YN2 538 aaKnown RBP11.05□□□□□ -0.64
NUP50-214ENST00000469163 MFN1Q8IWA4 741 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 PDILTQ8N807 584 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 DYDC1Q8WWB3 177 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 GOLGA1Q92805 767 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 UBA5Q9GZZ9 404 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 ATP6V0A4Q9HBG4 840 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 BATF3Q9NR55 127 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 DNAAF2Q9NVR5 837 aaKnown RBP11.05□□□□□ -0.64
NUP50-214ENST00000469163 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.05□□□□□ -0.64
NUP50-214ENST00000469163 NEDD4P46934 1319 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 ZBTB43O43298 467 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 ZSCAN12O43309 604 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 ECE2O60344 883 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 E4F1Q66K89 784 aaPredicted RBP11.05□□□□□ -0.64
NUP50-214ENST00000469163 MIPOL1Q8TD10 442 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 FAM81BQ96LP2 452 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 SLC39A2Q9NP94 309 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 TMOD2Q9NZR1 351 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 KCPQ6ZWJ8 1503 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 A0A087WWV3 80 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 EIF4E1BA6NMX2 242 aaKnown RBP11.05□□□□□ -0.64
NUP50-214ENST00000469163 BRD3Q15059 726 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 KBTBD12Q3ZCT8 623 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 WDR78Q5VTH9 848 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 RBM41Q96IZ5 413 aaKnown RBP11.05□□□□□ -0.64
NUP50-214ENST00000469163 GBP3Q9H0R5 595 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 PCDHGC5Q9Y5F6 944 aa11.05□□□□□ -0.64
NUP50-214ENST00000469163 TCHHQ07283 1943 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 AHCYL1O43865 530 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 CYB5R4Q7L1T6 521 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 FLAD1Q8NFF5 587 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 NLGN2Q8NFZ4 835 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 NKX2-3Q8TAU0 364 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 C8orf76Q96K31 380 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 COL14A1Q05707 1796 aaKnown RBP11.04□□□□□ -0.64
NUP50-214ENST00000469163 LGR5O75473 907 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 ADRA2BP18089 450 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 ATP2B4P23634 1241 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 NIM1KQ8IY84 436 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 ELOA2Q8IYF1 753 aaPredicted RBP11.04□□□□□ -0.64
NUP50-214ENST00000469163 WDR66Q8TBY9 1149 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 SPAG5Q96R06 1193 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 EHD4Q9H223 541 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 BUB1BO60566 1050 aaPredicted RBP11.04□□□□□ -0.64
NUP50-214ENST00000469163 MYO1EQ12965 1108 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 SAMD7Q7Z3H4 446 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 RABGGTAQ92696 567 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 ALS2CR12Q96Q35 445 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 SLX1AQ9BQ83 275 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 PLA2G12BQ9BX93 195 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 TBC1D7Q9P0N9 293 aa11.04□□□□□ -0.64
NUP50-214ENST00000469163 NDUFAB1O14561 156 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 EIF4BP23588 611 aaKnown RBP11.03□□□□□ -0.64
NUP50-214ENST00000469163 IARSP41252 1262 aaKnown RBP11.03□□□□□ -0.64
NUP50-214ENST00000469163 PLCD1P51178 756 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 PDE4BQ07343 736 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 NFIAQ12857 509 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 DALRD3Q5D0E6 543 aaKnown RBP11.03□□□□□ -0.64
NUP50-214ENST00000469163 ESR2Q92731 530 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 CNKSR1Q969H4 720 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 EYA3Q99504 573 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 KAT14Q9H8E8 782 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 EPB41L4AQ9HCS5 686 aaPredicted RBP11.03□□□□□ -0.64
NUP50-214ENST00000469163 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
NUP50-214ENST00000469163 DYTNA2CJ06 578 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 GSG1L2A8MUP6 293 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 OPA1O60313 960 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 FESP07332 822 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 LDHCP07864 332 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 SLC16A2P36021 539 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 TXLNAP40222 546 aa11.03□□□□□ -0.64
NUP50-214ENST00000469163 CHMP4BP1P59074 171 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms