RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 CCDC144BQ3MJ40 725 aa21.21■□□□□ 0.99
CGREF1-208ENST00000467539 RALYLQ86SE5 291 aaKnown RBP21.21■□□□□ 0.99
CGREF1-208ENST00000467539 SKAP1Q86WV1 359 aa21.21■□□□□ 0.99
CGREF1-208ENST00000467539 RGS22Q8NE09 1264 aa21.21■□□□□ 0.99
CGREF1-208ENST00000467539 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
CGREF1-208ENST00000467539 TSEN34Q9BSV6 310 aaKnown RBP21.21■□□□□ 0.99
CGREF1-208ENST00000467539 MAF1Q9H063 256 aa21.21■□□□□ 0.99
CGREF1-208ENST00000467539 CPVLQ9H3G5 476 aa21.21■□□□□ 0.99
CGREF1-208ENST00000467539 PHF24Q9UPV7 400 aa21.21■□□□□ 0.99
CGREF1-208ENST00000467539 LOC102724159A0A0B4J2E5 919 aa21.2■□□□□ 0.98
CGREF1-208ENST00000467539 NFIBO00712 420 aa21.2■□□□□ 0.98
CGREF1-208ENST00000467539 ADAMTS4O75173 837 aa21.2■□□□□ 0.98
CGREF1-208ENST00000467539 ATN1P54259 1190 aaPredicted RBP21.2■□□□□ 0.98
CGREF1-208ENST00000467539 PWP2Q15269 919 aaKnown RBP21.2■□□□□ 0.98
CGREF1-208ENST00000467539 STOX1Q6ZVD7 989 aa21.2■□□□□ 0.98
CGREF1-208ENST00000467539 KLHDC9Q8NEP7 349 aa21.2■□□□□ 0.98
CGREF1-208ENST00000467539 MORC4Q8TE76 937 aa21.2■□□□□ 0.98
CGREF1-208ENST00000467539 RBM27Q9P2N5 1060 aaKnown RBP21.2■□□□□ 0.98
CGREF1-208ENST00000467539 ADD3Q9UEY8 706 aaKnown RBP21.2■□□□□ 0.98
CGREF1-208ENST00000467539 ERICH2A1L162 156 aa21.19■□□□□ 0.98
CGREF1-208ENST00000467539 C1orf53Q5VUE5 145 aa21.19■□□□□ 0.98
CGREF1-208ENST00000467539 IGDCC4Q8TDY8 1250 aa21.19■□□□□ 0.98
CGREF1-208ENST00000467539 GDF15Q99988 308 aa21.19■□□□□ 0.98
CGREF1-208ENST00000467539 JMJD4Q9H9V9 463 aa21.19■□□□□ 0.98
CGREF1-208ENST00000467539 ZMYND8Q9ULU4 1186 aaPredicted RBP21.19■□□□□ 0.98
CGREF1-208ENST00000467539 ASTN1O14525 1302 aa21.19■□□□□ 0.98
CGREF1-208ENST00000467539 ALPK3Q96L96 1907 aa21.19■□□□□ 0.98
CGREF1-208ENST00000467539 FRMPD3Q5JV73 1810 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 PALM3A6NDB9 673 aaPredicted RBP21.18■□□□□ 0.98
CGREF1-208ENST00000467539 KLRF2D3W0D1 207 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 BMP8BP34820 402 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 SART3Q15020 963 aaKnown RBP21.18■□□□□ 0.98
CGREF1-208ENST00000467539 NECTIN1Q15223 517 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 IQSEC1Q6DN90 963 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 CCSAPQ6IQ19 270 aaPredicted RBP21.18■□□□□ 0.98
CGREF1-208ENST00000467539 RNF207Q6ZRF8 634 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 STAG2Q8N3U4 1231 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 FERMT2Q96AC1 680 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 PURBQ96QR8 312 aaKnown RBP21.18■□□□□ 0.98
CGREF1-208ENST00000467539 MTA3Q9BTC8 594 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 VAT1LQ9HCJ6 419 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 MAD2L2Q9UI95 211 aa21.18■□□□□ 0.98
CGREF1-208ENST00000467539 DNAH12Q6ZR08 3092 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 PTPDC1A2A3K4 754 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 SLC34A2O95436 690 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 SYN1P17600 705 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 GJA9P57773 515 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 NKX3-2P78367 333 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 WTAPQ15007 396 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 SNX17Q15036 470 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 CDC37Q16543 378 aaPredicted RBP21.17■□□□□ 0.98
CGREF1-208ENST00000467539 CHST3Q7LGC8 479 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 MB21D2Q8IYB1 491 aaPredicted RBP21.17■□□□□ 0.98
CGREF1-208ENST00000467539 LENG1Q96BZ8 264 aaPredicted RBP21.17■□□□□ 0.98
CGREF1-208ENST00000467539 UPF3AQ9H1J1 476 aaKnown RBP21.17■□□□□ 0.98
CGREF1-208ENST00000467539 SPC25Q9HBM1 224 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 SYNRGQ9UMZ2 1314 aa21.17■□□□□ 0.98
CGREF1-208ENST00000467539 ABCB11O95342 1321 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 ADCY6O43306 1168 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 CST5P28325 142 aaPredicted RBP21.16■□□□□ 0.98
CGREF1-208ENST00000467539 ANTXR2P58335 489 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 RTP1P59025 263 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 RPS6P62753 249 aaKnown RBP21.16■□□□□ 0.98
CGREF1-208ENST00000467539 TNFAIP2Q03169 654 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 KCNA10Q16322 511 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 QRICH1Q2TAL8 776 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 USH1GQ495M9 461 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 TAPT1Q6NXT6 567 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 FBXO11Q86XK2 927 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 MTMR8Q96EF0 704 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 SENP2Q9HC62 589 aa21.16■□□□□ 0.98
CGREF1-208ENST00000467539 A0A1W2PPC1 479 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 MOXD2PA6NHM9 499 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 SLC27A2O14975 620 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 CALML3P27482 149 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 ALDH5A1P51649 535 aaPredicted RBP21.15■□□□□ 0.98
CGREF1-208ENST00000467539 ACLYP53396 1101 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 TROAPQ12815 778 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 TMEM67Q5HYA8 995 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 CREB3L3Q68CJ9 461 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 DNERQ8NFT8 737 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 VTA1Q9NP79 307 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 ANO2Q9NQ90 1003 aa21.15■□□□□ 0.98
CGREF1-208ENST00000467539 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.14■□□□□ 0.97
CGREF1-208ENST00000467539 DHX16O60231 1041 aaKnown RBP21.14■□□□□ 0.97
CGREF1-208ENST00000467539 GRM4Q14833 912 aa21.14■□□□□ 0.97
CGREF1-208ENST00000467539 SLC30A10Q6XR72 485 aa21.14■□□□□ 0.97
CGREF1-208ENST00000467539 TMTC2Q8N394 836 aa21.14■□□□□ 0.97
CGREF1-208ENST00000467539 PCSK9Q8NBP7 692 aaKnown RBP21.14■□□□□ 0.97
CGREF1-208ENST00000467539 NUP133Q8WUM0 1156 aa21.14■□□□□ 0.97
CGREF1-208ENST00000467539 TBC1D5Q92609 795 aa21.14■□□□□ 0.97
CGREF1-208ENST00000467539 RIOX1Q9H6W3 641 aa21.14■□□□□ 0.97
CGREF1-208ENST00000467539 PDGFCQ9NRA1 345 aa21.14■□□□□ 0.97
CGREF1-208ENST00000467539 GNEQ9Y223 722 aaKnown RBP21.14■□□□□ 0.97
CGREF1-208ENST00000467539 ATP11BQ9Y2G3 1177 aa21.14■□□□□ 0.97
CGREF1-208ENST00000467539 MRPL11Q9Y3B7 192 aaKnown RBP21.14■□□□□ 0.97
CGREF1-208ENST00000467539 Q9Y3F1 56 aa21.14■□□□□ 0.97
CGREF1-208ENST00000467539 DDX49Q9Y6V7 483 aaKnown RBP21.14■□□□□ 0.97
CGREF1-208ENST00000467539 A0A1W2PQ45 241 aaPredicted RBP21.13■□□□□ 0.97
CGREF1-208ENST00000467539 A0A1W2PQY0 241 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms