RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 U3KPZ7 1027 aaPredicted RBP25.53■■□□□ 1.68
LIME1-203ENST00000465591 MYH6P13533 1939 aa25.53■■□□□ 1.68
LIME1-203ENST00000465591 GPATCH4Q5T3I0 446 aaKnown RBP25.52■■□□□ 1.68
LIME1-203ENST00000465591 CLEC4DQ8WXI8 215 aa25.52■■□□□ 1.68
LIME1-203ENST00000465591 GDF15Q99988 308 aa25.52■■□□□ 1.68
LIME1-203ENST00000465591 ABHD16BQ9H3Z7 469 aa25.52■■□□□ 1.68
LIME1-203ENST00000465591 FAM184BQ9ULE4 1060 aa25.52■■□□□ 1.68
LIME1-203ENST00000465591 RTP1P59025 263 aa25.51■■□□□ 1.67
LIME1-203ENST00000465591 CCDC144BQ3MJ40 725 aa25.51■■□□□ 1.67
LIME1-203ENST00000465591 SLC39A5Q6ZMH5 540 aa25.51■■□□□ 1.67
LIME1-203ENST00000465591 MAP4K1Q92918 833 aa25.51■■□□□ 1.67
LIME1-203ENST00000465591 UBAC1Q9BSL1 405 aa25.51■■□□□ 1.67
LIME1-203ENST00000465591 PHF24Q9UPV7 400 aa25.51■■□□□ 1.67
LIME1-203ENST00000465591 SYNRGQ9UMZ2 1314 aa25.51■■□□□ 1.67
LIME1-203ENST00000465591 MYADML2A6NDP7 307 aa25.5■■□□□ 1.67
LIME1-203ENST00000465591 BAATQ14032 418 aaPredicted RBP25.5■■□□□ 1.67
LIME1-203ENST00000465591 WDR19Q8NEZ3 1342 aa25.49■■□□□ 1.67
LIME1-203ENST00000465591 E7EWF7 191 aa25.49■■□□□ 1.67
LIME1-203ENST00000465591 MAGEA10P43363 369 aaPredicted RBP25.49■■□□□ 1.67
LIME1-203ENST00000465591 SNX17Q15036 470 aa25.49■■□□□ 1.67
LIME1-203ENST00000465591 IFIT1BQ5T764 474 aaKnown RBP25.49■■□□□ 1.67
LIME1-203ENST00000465591 SLC30A10Q6XR72 485 aa25.49■■□□□ 1.67
LIME1-203ENST00000465591 RNF180Q86T96 592 aa25.49■■□□□ 1.67
LIME1-203ENST00000465591 SENP2Q9HC62 589 aa25.49■■□□□ 1.67
LIME1-203ENST00000465591 RBM8AQ9Y5S9 174 aaKnown RBP25.49■■□□□ 1.67
LIME1-203ENST00000465591 BAZ2BQ9UIF8 2168 aaKnown RBP25.48■■□□□ 1.67
LIME1-203ENST00000465591 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.48■■□□□ 1.67
LIME1-203ENST00000465591 DUSP11O75319 330 aaKnown RBP25.48■■□□□ 1.67
LIME1-203ENST00000465591 PTGS1P23219 599 aa25.48■■□□□ 1.67
LIME1-203ENST00000465591 ASPRV1Q53RT3 343 aa25.48■■□□□ 1.67
LIME1-203ENST00000465591 ADGRF4Q8IZF3 695 aa25.48■■□□□ 1.67
LIME1-203ENST00000465591 STAG2Q8N3U4 1231 aa25.48■■□□□ 1.67
LIME1-203ENST00000465591 KLHDC9Q8NEP7 349 aa25.48■■□□□ 1.67
LIME1-203ENST00000465591 LSG1Q9H089 658 aaKnown RBP25.48■■□□□ 1.67
LIME1-203ENST00000465591 ATP11BQ9Y2G3 1177 aa25.48■■□□□ 1.67
LIME1-203ENST00000465591 ASB14A6NK59 587 aa25.47■■□□□ 1.67
LIME1-203ENST00000465591 TRDNQ13061 729 aa25.47■■□□□ 1.67
LIME1-203ENST00000465591 CDC37Q16543 378 aaPredicted RBP25.47■■□□□ 1.67
LIME1-203ENST00000465591 TRIM60Q495X7 471 aa25.47■■□□□ 1.67
LIME1-203ENST00000465591 CCSAPQ6IQ19 270 aaPredicted RBP25.47■■□□□ 1.67
LIME1-203ENST00000465591 CHST3Q7LGC8 479 aa25.47■■□□□ 1.67
LIME1-203ENST00000465591 ESYT1Q9BSJ8 1104 aa25.47■■□□□ 1.67
LIME1-203ENST00000465591 LTBP2Q14767 1821 aa25.47■■□□□ 1.67
LIME1-203ENST00000465591 PTPDC1A2A3K4 754 aa25.46■■□□□ 1.67
LIME1-203ENST00000465591 PARP1P09874 1014 aaKnown RBP25.46■■□□□ 1.67
LIME1-203ENST00000465591 ANTXR2P58335 489 aa25.46■■□□□ 1.67
LIME1-203ENST00000465591 COL9A3Q14050 684 aaPredicted RBP25.46■■□□□ 1.67
LIME1-203ENST00000465591 USH1GQ495M9 461 aa25.46■■□□□ 1.67
LIME1-203ENST00000465591 EEPD1Q7L9B9 569 aa25.46■■□□□ 1.67
LIME1-203ENST00000465591 PDGFCQ9NRA1 345 aa25.46■■□□□ 1.67
LIME1-203ENST00000465591 A0A1W2PQ45 241 aaPredicted RBP25.45■■□□□ 1.66
LIME1-203ENST00000465591 A0A1W2PQY0 241 aa25.45■■□□□ 1.66
LIME1-203ENST00000465591 CTAGE5O15320 804 aa25.45■■□□□ 1.66
LIME1-203ENST00000465591 BMP2KLQ5H9B9 411 aa25.45■■□□□ 1.66
LIME1-203ENST00000465591 TMEM63BQ5T3F8 832 aa25.45■■□□□ 1.66
LIME1-203ENST00000465591 FBXO16Q8IX29 292 aaPredicted RBP25.45■■□□□ 1.66
LIME1-203ENST00000465591 MORC4Q8TE76 937 aa25.45■■□□□ 1.66
LIME1-203ENST00000465591 UPF3AQ9H1J1 476 aaKnown RBP25.45■■□□□ 1.66
LIME1-203ENST00000465591 JMJD4Q9H9V9 463 aa25.45■■□□□ 1.66
LIME1-203ENST00000465591 CALML3P27482 149 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 BMP8BP34820 402 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 ALDH5A1P51649 535 aaPredicted RBP25.44■■□□□ 1.66
LIME1-203ENST00000465591 ACLYP53396 1101 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 RPS6P62753 249 aaKnown RBP25.44■■□□□ 1.66
LIME1-203ENST00000465591 KCNA10Q16322 511 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 SLC35G1Q2M3R5 365 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 QRICH1Q2TAL8 776 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 TAPT1Q6NXT6 567 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 RNF207Q6ZRF8 634 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 MB21D2Q8IYB1 491 aaPredicted RBP25.44■■□□□ 1.66
LIME1-203ENST00000465591 NCOA7Q8NI08 942 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 VAT1LQ9HCJ6 419 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 MAD2L2Q9UI95 211 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 PNMA2Q9UL42 364 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 LAMA3Q16787 3333 aa25.44■■□□□ 1.66
LIME1-203ENST00000465591 SZT2Q5T011 3432 aa25.43■■□□□ 1.66
LIME1-203ENST00000465591 IFIT3O14879 490 aaKnown RBP25.43■■□□□ 1.66
LIME1-203ENST00000465591 C6orf222P0C671 652 aaPredicted RBP25.43■■□□□ 1.66
LIME1-203ENST00000465591 CST5P28325 142 aaPredicted RBP25.43■■□□□ 1.66
LIME1-203ENST00000465591 GJA9P57773 515 aa25.43■■□□□ 1.66
LIME1-203ENST00000465591 MDM2Q00987 491 aaPredicted RBP25.43■■□□□ 1.66
LIME1-203ENST00000465591 C1orf53Q5VUE5 145 aa25.43■■□□□ 1.66
LIME1-203ENST00000465591 RALYLQ86SE5 291 aaKnown RBP25.43■■□□□ 1.66
LIME1-203ENST00000465591 TBC1D5Q92609 795 aa25.43■■□□□ 1.66
LIME1-203ENST00000465591 TSEN34Q9BSV6 310 aaKnown RBP25.43■■□□□ 1.66
LIME1-203ENST00000465591 SMPD1P17405 629 aa25.42■■□□□ 1.66
LIME1-203ENST00000465591 TNFAIP2Q03169 654 aa25.42■■□□□ 1.66
LIME1-203ENST00000465591 GNEQ9Y223 722 aaKnown RBP25.42■■□□□ 1.66
LIME1-203ENST00000465591 A0A1W2PPC1 479 aa25.41■■□□□ 1.66
LIME1-203ENST00000465591 PALM3A6NDB9 673 aaPredicted RBP25.41■■□□□ 1.66
LIME1-203ENST00000465591 KLRF2D3W0D1 207 aa25.41■■□□□ 1.66
LIME1-203ENST00000465591 TLE2Q04725 743 aa25.41■■□□□ 1.66
LIME1-203ENST00000465591 KIAA1211Q6ZU35 1233 aa25.41■■□□□ 1.66
LIME1-203ENST00000465591 SH3RF1Q7Z6J0 888 aa25.41■■□□□ 1.66
LIME1-203ENST00000465591 IGDCC4Q8TDY8 1250 aa25.41■■□□□ 1.66
LIME1-203ENST00000465591 GPHNQ9NQX3 736 aaPredicted RBP25.41■■□□□ 1.66
LIME1-203ENST00000465591 PDLIM7Q9NR12 457 aa25.41■■□□□ 1.66
LIME1-203ENST00000465591 ADD3Q9UEY8 706 aaKnown RBP25.41■■□□□ 1.66
LIME1-203ENST00000465591 SOX1O00570 391 aaPredicted RBP25.4■■□□□ 1.66
LIME1-203ENST00000465591 DHX16O60231 1041 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms