RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 MTMR9Q96QG7 549 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 SEMA3FQ13275 785 aa15.71■□□□□ 0.11
PTPRN-210ENST00000460801 IGSF22Q8N9C0 903 aa15.71■□□□□ 0.11
PTPRN-210ENST00000460801 RASSF8Q8NHQ8 419 aa15.71■□□□□ 0.11
PTPRN-210ENST00000460801 LRRC15Q8TF66 581 aa15.71■□□□□ 0.11
PTPRN-210ENST00000460801 DCAF4Q8WV16 495 aa15.71■□□□□ 0.11
PTPRN-210ENST00000460801 MAGEF1Q9HAY2 307 aa15.71■□□□□ 0.11
PTPRN-210ENST00000460801 RWDD2AQ9UIY3 292 aa15.71■□□□□ 0.11
PTPRN-210ENST00000460801 COL2A1P02458 1487 aaPredicted RBP15.71■□□□□ 0.11
PTPRN-210ENST00000460801 KCNB1Q14721 858 aa15.71■□□□□ 0.1
PTPRN-210ENST00000460801 E4F1Q66K89 784 aaPredicted RBP15.71■□□□□ 0.1
PTPRN-210ENST00000460801 SPECC1LQ69YQ0 1117 aa15.71■□□□□ 0.1
PTPRN-210ENST00000460801 TMEM179Q6ZVK1 233 aa15.71■□□□□ 0.1
PTPRN-210ENST00000460801 POTEDQ86YR6 584 aa15.71■□□□□ 0.1
PTPRN-210ENST00000460801 CCDC112Q8NEF3 446 aa15.71■□□□□ 0.1
PTPRN-210ENST00000460801 PRMT6Q96LA8 375 aaPredicted RBP15.71■□□□□ 0.1
PTPRN-210ENST00000460801 TRIM34Q9BYJ4 488 aa15.71■□□□□ 0.1
PTPRN-210ENST00000460801 PDGFDQ9GZP0 370 aaPredicted RBP15.71■□□□□ 0.1
PTPRN-210ENST00000460801 CTNND2Q9UQB3 1225 aa15.71■□□□□ 0.1
PTPRN-210ENST00000460801 KLRC4O43908 158 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 SEPT2Q15019 361 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 PTPN21Q16825 1174 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 MMTAG2Q9BU76 263 aaKnown RBP15.7■□□□□ 0.1
PTPRN-210ENST00000460801 PSDA5PKW4 1024 aaPredicted RBP15.7■□□□□ 0.1
PTPRN-210ENST00000460801 PLCG1P19174 1290 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 TECP42680 631 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 SLC1A4P43007 532 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 MRPL12P52815 198 aaKnown RBP15.7■□□□□ 0.1
PTPRN-210ENST00000460801 PAK1Q13153 545 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 SLFN13Q68D06 897 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 CUL5Q93034 780 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 PSMD1Q99460 953 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 PLIN2Q99541 437 aa15.7■□□□□ 0.1
PTPRN-210ENST00000460801 TRMT1Q9NXH9 659 aaKnown RBP15.7■□□□□ 0.1
PTPRN-210ENST00000460801 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
PTPRN-210ENST00000460801 ICA1Q05084 483 aa15.69■□□□□ 0.1
PTPRN-210ENST00000460801 PTPN14Q15678 1187 aa15.69■□□□□ 0.1
PTPRN-210ENST00000460801 CALCRLQ16602 461 aa15.69■□□□□ 0.1
PTPRN-210ENST00000460801 ABCB5Q2M3G0 1257 aa15.69■□□□□ 0.1
PTPRN-210ENST00000460801 CCDC93Q567U6 631 aa15.69■□□□□ 0.1
PTPRN-210ENST00000460801 RTKN2Q8IZC4 609 aa15.69■□□□□ 0.1
PTPRN-210ENST00000460801 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
PTPRN-210ENST00000460801 ADD3Q9UEY8 706 aaKnown RBP15.69■□□□□ 0.1
PTPRN-210ENST00000460801 GDAQ9Y2T3 454 aa15.69■□□□□ 0.1
PTPRN-210ENST00000460801 RIOK3O14730 519 aaKnown RBP15.68■□□□□ 0.1
PTPRN-210ENST00000460801 SLC37A4O43826 429 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 RHOBTB3O94955 611 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 TDP2O95551 362 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 TXKP42681 527 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 PRCPP42785 496 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 UBE2SQ16763 222 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 KMT5BQ4FZB7 885 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 PPP4R3AQ6IN85 833 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 TMEM139Q8IV31 216 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 ADSSL1Q8N142 457 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 PAXBP1Q9Y5B6 917 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 LRRC10BA6NIK2 292 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 PBX1P40424 430 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 TNNI2P48788 182 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 QRICH1Q2TAL8 776 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 CEP135Q66GS9 1140 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 RSBN1LQ6PCB5 846 aaPredicted RBP15.68■□□□□ 0.1
PTPRN-210ENST00000460801 GMCL1P1Q8NEA9 526 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 NELFBQ8WX92 580 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 GMLQ99445 158 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 GLT8D2Q9H1C3 349 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 PSTPIP2Q9H939 334 aa15.68■□□□□ 0.1
PTPRN-210ENST00000460801 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
PTPRN-210ENST00000460801 ARFGEF1Q9Y6D6 1849 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 TEX33O43247 280 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 GDF11O95390 407 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 VIL1P09327 827 aaKnown RBP15.67■□□□□ 0.1
PTPRN-210ENST00000460801 KCNA3P22001 575 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 GOLGA8FQ08AF8 430 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 GOLGA8DPQ0D2H9 430 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 PDIA5Q14554 519 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 TC2NQ8N9U0 490 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 LIMA1Q9UHB6 759 aaKnown RBP15.67■□□□□ 0.1
PTPRN-210ENST00000460801 MYH7BA7E2Y1 1941 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 F5H6K3 240 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 JAG1P78504 1218 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 KLRC3Q07444 240 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 GIMAP8Q8ND71 665 aaPredicted RBP15.67■□□□□ 0.1
PTPRN-210ENST00000460801 CALML4Q96GE6 196 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 GMCL1Q96IK5 515 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 PPP1R13BQ96KQ4 1090 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 C7orf25Q9BPX7 421 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 LRWD1Q9UFC0 647 aa15.67■□□□□ 0.1
PTPRN-210ENST00000460801 RAD21O60216 631 aa15.66■□□□□ 0.1
PTPRN-210ENST00000460801 COBLO75128 1261 aa15.66■□□□□ 0.1
PTPRN-210ENST00000460801 RRP1BQ14684 758 aaKnown RBP15.66■□□□□ 0.1
PTPRN-210ENST00000460801 CSRNP1Q96S65 589 aa15.66■□□□□ 0.1
PTPRN-210ENST00000460801 TRIM9Q9C026 710 aa15.66■□□□□ 0.1
PTPRN-210ENST00000460801 PCDHA1Q9Y5I3 950 aa15.66■□□□□ 0.1
PTPRN-210ENST00000460801 H7C1D1 291 aa15.66■□□□□ 0.1
PTPRN-210ENST00000460801 KIF2AO00139 706 aaPredicted RBP15.66■□□□□ 0.1
PTPRN-210ENST00000460801 GCFC2P16383 781 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms