RNA–Protein interactions for RNA: ENST00000458033.5

ARPC1B-213, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-213ENST00000458033 INHAP05111 366 aa23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 RXRAP19793 462 aa23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 RBM25P49756 843 aaKnown RBP23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 APOBRQ0VD83 1088 aa23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 TOB2Q14106 344 aaPredicted RBP23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 MAF1Q9H063 256 aa23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 HOMER2Q9NSB8 354 aa23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 PDRG1Q9NUG6 133 aa23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 DIS3Q9Y2L1 958 aaKnown RBP23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 PFASO15067 1338 aa23.31■■□□□ 1.32
ARPC1B-213ENST00000458033 DNAJC25-GNG10A0A024R161 153 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 HMGCRP04035 888 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 SLC4A3P48751 1232 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 MTFR1Q15390 333 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 RTN1Q16799 776 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 TMTC3Q6ZXV5 915 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 DPP9Q86TI2 863 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 UPF2Q9HAU5 1272 aaKnown RBP23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 VAT1LQ9HCJ6 419 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 LRRC37A2A6NM11 1700 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 ABCB11O95342 1321 aa23.3■■□□□ 1.32
ARPC1B-213ENST00000458033 GOLGA8AA7E2F4 631 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 GOLGA8BA8MQT2 603 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 COBLO75128 1261 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 CCL5P13501 91 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 TRAF1Q13077 416 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 MUM1L1Q5H9M0 696 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 FBXO11Q86XK2 927 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 RAB11FIP4Q86YS3 637 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 CCDC144CPQ8IYA2 1237 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 SRBD1Q8N5C6 995 aaKnown RBP23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 NPLOC4Q8TAT6 608 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 TRIB2Q92519 343 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 AMNQ9BXJ7 453 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 C22orf23Q9BZE7 217 aa23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 A1CFQ9NQ94 594 aaKnown RBP23.29■■□□□ 1.32
ARPC1B-213ENST00000458033 CCDC196A0A1B0GTZ2 297 aa23.28■■□□□ 1.32
ARPC1B-213ENST00000458033 PLEKHA8P1O95397 391 aa23.28■■□□□ 1.32
ARPC1B-213ENST00000458033 IGHA2P01877 340 aa23.28■■□□□ 1.32
ARPC1B-213ENST00000458033 METAP2P50579 478 aaKnown RBP eCLIP23.28■■□□□ 1.323e-6■□□□□ 11.2
ARPC1B-213ENST00000458033 OLFML2BQ68BL8 750 aa23.28■■□□□ 1.32
ARPC1B-213ENST00000458033 ANKRD35Q8N283 1001 aa23.28■■□□□ 1.32
ARPC1B-213ENST00000458033 DDX11Q96FC9 970 aa23.28■■□□□ 1.32
ARPC1B-213ENST00000458033 RNF208Q9H0X6 261 aa23.28■■□□□ 1.32
ARPC1B-213ENST00000458033 PNMA6FA0A0J9YX94 578 aa23.27■■□□□ 1.32
ARPC1B-213ENST00000458033 ZNF792Q3KQV3 632 aa23.27■■□□□ 1.32
ARPC1B-213ENST00000458033 CLEC4DQ8WXI8 215 aa23.27■■□□□ 1.32
ARPC1B-213ENST00000458033 RRP36Q96EU6 259 aaKnown RBP23.27■■□□□ 1.32
ARPC1B-213ENST00000458033 ZNF274Q96GC6 653 aaPredicted RBP23.27■■□□□ 1.32
ARPC1B-213ENST00000458033 PIGSQ96S52 555 aa23.27■■□□□ 1.32
ARPC1B-213ENST00000458033 FAM217BQ9NTX9 383 aaPredicted RBP23.27■■□□□ 1.32
ARPC1B-213ENST00000458033 PPP1R11O60927 126 aaPredicted RBP23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 TAL1P17542 331 aaPredicted RBP23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 ANKRD1Q15327 319 aa23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 CCL14Q16627 93 aa23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 USH1GQ495M9 461 aa23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 ZNF467Q7Z7K2 595 aaPredicted RBP23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 HOMER1Q86YM7 354 aa23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 RGS22Q8NE09 1264 aa23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 MAML3Q96JK9 1138 aa23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 CYP39A1Q9NYL5 469 aa23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 CNTNAP5Q8WYK1 1306 aa23.26■■□□□ 1.31
ARPC1B-213ENST00000458033 NFIBO00712 420 aa23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 PGK2P07205 417 aa23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 GJB1P08034 283 aa23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 EN2P19622 333 aaPredicted RBP23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 PDIA3P30101 505 aaKnown RBP23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 CDC27P30260 824 aa23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 MSL3Q8N5Y2 521 aaKnown RBP23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 BACH2Q9BYV9 841 aa23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 UNC93B1Q9H1C4 597 aa23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 FLRT1Q9NZU1 646 aa23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 SEC63Q9UGP8 760 aaKnown RBP23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 NAP1L2Q9ULW6 460 aaPredicted RBP23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 MRPL11Q9Y3B7 192 aaKnown RBP23.25■■□□□ 1.31
ARPC1B-213ENST00000458033 TNRC18O15417 2968 aaPredicted RBP23.24■■□□□ 1.31
ARPC1B-213ENST00000458033 FUT2Q10981 343 aa23.24■■□□□ 1.31
ARPC1B-213ENST00000458033 MAP3K21Q5TCX8 1036 aa23.24■■□□□ 1.31
ARPC1B-213ENST00000458033 FAM133AQ8N9E0 248 aa23.24■■□□□ 1.31
ARPC1B-213ENST00000458033 KIF2CQ99661 725 aa23.24■■□□□ 1.31
ARPC1B-213ENST00000458033 GHRHRQ02643 423 aa23.23■■□□□ 1.31
ARPC1B-213ENST00000458033 MFSD14CQ5VZR4 134 aa23.23■■□□□ 1.31
ARPC1B-213ENST00000458033 NSMFQ6X4W1 530 aa23.23■■□□□ 1.31
ARPC1B-213ENST00000458033 CMTR1Q8N1G2 835 aaKnown RBP23.23■■□□□ 1.31
ARPC1B-213ENST00000458033 SAMD3Q8N6K7 520 aa23.23■■□□□ 1.31
ARPC1B-213ENST00000458033 IL27Q8NEV9 243 aa23.23■■□□□ 1.31
ARPC1B-213ENST00000458033 PCDHA1Q9Y5I3 950 aa23.23■■□□□ 1.31
ARPC1B-213ENST00000458033 KIAA1217Q5T5P2 1943 aa23.23■■□□□ 1.31
ARPC1B-213ENST00000458033 POTEB2H3BUK9 544 aa23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 CAPN2P17655 700 aa23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 GJA8P48165 433 aa23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 NEK4P51957 841 aa23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 AK2P54819 239 aa23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 MAMDC4Q6UXC1 1216 aa23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 RNF207Q6ZRF8 634 aa23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 MCF2L2Q86YR7 1114 aa23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 FGD4Q96M96 766 aa23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.22■■□□□ 1.316e-6■■■■□ 24.6
ARPC1B-213ENST00000458033 HMX1Q9NP08 348 aaPredicted RBP23.22■■□□□ 1.31
ARPC1B-213ENST00000458033 PAK6Q9NQU5 681 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms