RNA–Protein interactions for RNA: ENST00000455730.2

LDHBP1-201, Transcript of lactate dehydrogenase B pseudogene 1, humanhuman

BASIC

Gene LDHBP1, Length 1,119 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP1-201ENST00000455730 AACSQ86V21 672 aa16.69■□□□□ 0.26
LDHBP1-201ENST00000455730 CPXCR1Q8N123 301 aa16.69■□□□□ 0.26
LDHBP1-201ENST00000455730 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
LDHBP1-201ENST00000455730 CCDC17Q96LX7 622 aa16.69■□□□□ 0.26
LDHBP1-201ENST00000455730 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
LDHBP1-201ENST00000455730 TRMT13Q9NUP7 481 aaKnown RBP16.69■□□□□ 0.26
LDHBP1-201ENST00000455730 LMCD1Q9NZU5 365 aa16.69■□□□□ 0.26
LDHBP1-201ENST00000455730 PTPRSQ13332 1948 aa16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 BAZ2AQ9UIF9 1905 aaKnown RBP16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 DCXO43602 365 aa16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 ZEB2O60315 1214 aa16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 PTCRAQ6ISU1 281 aaPredicted RBP16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 ANKS1AQ92625 1134 aa16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 PHOX2BQ99453 314 aa16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 NUP88Q99567 741 aaPredicted RBP16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 ZNF536O15090 1300 aa16.68■□□□□ 0.26
LDHBP1-201ENST00000455730 DYNC1LI2O43237 492 aaPredicted RBP16.67■□□□□ 0.26
LDHBP1-201ENST00000455730 RHPN1Q8TCX5 695 aa16.67■□□□□ 0.26
LDHBP1-201ENST00000455730 KANSL2Q9H9L4 492 aa16.67■□□□□ 0.26
LDHBP1-201ENST00000455730 POTEB3A0JP26 581 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 LCHNA4D1U4 455 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 ATP2A1O14983 1001 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 SUPT20HL2P0C7V6 817 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 SMPD1P17405 629 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 CDK8P49336 464 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 CNTN2Q02246 1040 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 POTEBQ6S5H4 581 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 LCORLQ8N3X6 602 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 RAVER2Q9HCJ3 691 aaKnown RBP16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 TNKSO95271 1327 aa16.66■□□□□ 0.26
LDHBP1-201ENST00000455730 TANC1Q9C0D5 1861 aa16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 GRXCR2A6NFK2 248 aa16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 PDE6AP16499 860 aa16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 RFC2P35250 354 aa16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 HFE2Q6ZVN8 426 aa16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 FTOQ9C0B1 505 aaKnown RBP eCLIP16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 CTDP1Q9Y5B0 961 aaPredicted RBP16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 ZDBF2Q9HCK1 2354 aa16.65■□□□□ 0.26
LDHBP1-201ENST00000455730 ST18O60284 1047 aa16.64■□□□□ 0.25
LDHBP1-201ENST00000455730 ZBED4O75132 1171 aa16.64■□□□□ 0.25
LDHBP1-201ENST00000455730 SLC9C2Q5TAH2 1124 aa16.64■□□□□ 0.25
LDHBP1-201ENST00000455730 PRPF38AQ8NAV1 312 aaKnown RBP16.64■□□□□ 0.25
LDHBP1-201ENST00000455730 CHST13Q8NET6 341 aa16.64■□□□□ 0.25
LDHBP1-201ENST00000455730 SUGCTQ9HAC7 445 aa16.64■□□□□ 0.25
LDHBP1-201ENST00000455730 MTUS1Q9ULD2 1270 aa16.64■□□□□ 0.25
LDHBP1-201ENST00000455730 CYP2D7A0A087X1C5 515 aa16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 IQCF3P0C7M6 154 aa16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 TMEM63BQ5T3F8 832 aa16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 TMCO2Q7Z6W1 182 aaPredicted RBP16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 FAM133AQ8N9E0 248 aa16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 PDGFCQ9NRA1 345 aa16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
LDHBP1-201ENST00000455730 TRIP12Q14669 1992 aaPredicted RBP16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 SIP14410 1827 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 PRKAB2O43741 272 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 BAIAP3O94812 1187 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 NDUFB10O96000 172 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 CHGBP05060 677 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 KCNJ6P48051 423 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 PUS10Q3MIT2 529 aaKnown RBP16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 C12orf60Q5U649 245 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 C16orf86Q6ZW13 317 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 RPAP2Q8IXW5 612 aaPredicted RBP16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 ARMT1Q9H993 441 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 SLC38A10Q9HBR0 1119 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 HOMER2Q9NSB8 354 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 Q9Y3F1 56 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 CACNA1AO00555 2505 aa16.62■□□□□ 0.25
LDHBP1-201ENST00000455730 GREB1LQ9C091 1923 aaPredicted RBP16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 ASB14A6NK59 587 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 F5H6K3 240 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 KLRC3Q07444 240 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 EEPD1Q7L9B9 569 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 FBXO16Q8IX29 292 aaPredicted RBP16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 MFSD14AQ96MC6 490 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 ZBED2Q9BTP6 218 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 USP34Q70CQ2 3546 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 CFAP54Q96N23 3096 aa16.61■□□□□ 0.25
LDHBP1-201ENST00000455730 SCN10AQ9Y5Y9 1956 aa16.6■□□□□ 0.25
LDHBP1-201ENST00000455730 TECTAO75443 2155 aa16.6■□□□□ 0.25
LDHBP1-201ENST00000455730 TCRBV5S4A2TA0A5A2 114 aa16.6■□□□□ 0.25
LDHBP1-201ENST00000455730 H3BQ06 376 aaPredicted RBP16.6■□□□□ 0.25
LDHBP1-201ENST00000455730 PITPNM1O00562 1244 aa16.6■□□□□ 0.25
LDHBP1-201ENST00000455730 MS4A1P11836 297 aa16.6■□□□□ 0.25
LDHBP1-201ENST00000455730 ERVK-21P61565 698 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms