RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 MMP1P03956 469 aa19.09■□□□□ 0.65
CCDC90B-202ENST00000455220 TAL1P17542 331 aaPredicted RBP19.09■□□□□ 0.65
CCDC90B-202ENST00000455220 STAT3P40763 770 aa19.09■□□□□ 0.65
CCDC90B-202ENST00000455220 IFFO2Q5TF58 517 aa19.09■□□□□ 0.65
CCDC90B-202ENST00000455220 SNRNP48Q6IEG0 339 aaKnown RBP19.09■□□□□ 0.65
CCDC90B-202ENST00000455220 GALNT17Q6IS24 598 aa19.09■□□□□ 0.65
CCDC90B-202ENST00000455220 OPLAHO14841 1288 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 ALDH1A1P00352 501 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 CALML3P27482 149 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 GUCY1B3Q02153 619 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 PKP1Q13835 747 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 TAF1CQ15572 869 aaPredicted RBP19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 TKFCQ3LXA3 575 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 TEX2Q8IWB9 1127 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 DAGLBQ8NCG7 672 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 SPATC1LQ9H0A9 340 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 MORF4L1Q9UBU8 362 aa19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 MRPL11Q9Y3B7 192 aaKnown RBP19.08■□□□□ 0.65
CCDC90B-202ENST00000455220 SMCO2A6NFE2 343 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 PEX10O60683 326 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 BRD1O95696 1058 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 NLRP5P59047 1200 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 ERVK-9P63128 1117 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 ERVK-24P63145 666 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 RIOX2Q8IUF8 465 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 PAGR1Q9BTK6 254 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 RIC8AQ9NPQ8 531 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 RIPK3Q9Y572 518 aa19.07■□□□□ 0.64
CCDC90B-202ENST00000455220 VPS37CA5D8V6 355 aaPredicted RBP19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 ALAS1P13196 640 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 GNA11P29992 359 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 GHRHRQ02643 423 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 CLEC4DQ8WXI8 215 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 GLT8D2Q9H1C3 349 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 C6orf50Q9HD87 102 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 PCDHA4Q9UN74 947 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 ZDHHC9Q9Y397 364 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 M0R2N6 131 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 CA12O43570 354 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 TLR2O60603 784 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 BCRP11274 1271 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 COPB2P35606 906 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 ADCY7P51828 1080 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 NUCB2P80303 420 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 PLS1Q14651 629 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 FAM110CQ1W6H9 321 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 Q3C1V9 767 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 DIS3L2Q8IYB7 885 aaKnown RBP19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 CUL5Q93034 780 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 TRERF1Q96PN7 1200 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 MOV10L1Q9BXT6 1211 aaKnown RBP19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 PSTPIP2Q9H939 334 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 ZFYVE28Q9HCC9 887 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 RNF146Q9NTX7 359 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 CHMP5Q9NZZ3 219 aa19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 RBBP6Q7Z6E9 1792 aaKnown RBP19.06■□□□□ 0.64
CCDC90B-202ENST00000455220 SLC25A27O95847 323 aa19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 ZSCAN22P10073 491 aaPredicted RBP19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 SAFBQ15424 915 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 BLIDQ8IZY5 108 aa19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 ANKRD13CQ8N6S4 541 aa19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 SHCBP1Q8NEM2 672 aa19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 CHST13Q8NET6 341 aa19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 GPRC5AQ8NFJ5 357 aa19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 BICD2Q8TD16 824 aa19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 MAF1Q9H063 256 aa19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 FOXP1Q9H334 677 aaPredicted RBP19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 BRMS1Q9HCU9 246 aa19.05■□□□□ 0.64
CCDC90B-202ENST00000455220 PIK3CDO00329 1044 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 NFIBO00712 420 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 ADAMTS3O15072 1205 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 U2AF2P26368 475 aaKnown RBP eCLIP19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 KRT2P35908 639 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 CLK2P49760 499 aaKnown RBP19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 MRPL12P52815 198 aaKnown RBP19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 CRHR2Q13324 411 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 MUM1L1Q5H9M0 696 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 C17orf99Q6UX52 265 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 SAMD3Q8N6K7 520 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 OXER1Q8TDS5 423 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 TNFRSF25Q93038 417 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 CFHR5Q9BXR6 569 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 ACAD9Q9H845 621 aa19.04■□□□□ 0.64
CCDC90B-202ENST00000455220 BTBD18B2RXH4 712 aa19.03■□□□□ 0.64
CCDC90B-202ENST00000455220 MEIS2O14770 477 aa19.03■□□□□ 0.64
CCDC90B-202ENST00000455220 MCF2L2Q86YR7 1114 aa19.03■□□□□ 0.64
CCDC90B-202ENST00000455220 HOMER2Q9NSB8 354 aa19.03■□□□□ 0.64
CCDC90B-202ENST00000455220 FBXO40Q9UH90 709 aa19.03■□□□□ 0.64
CCDC90B-202ENST00000455220 KIF28PB7ZC32 967 aa19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 ERCC3P19447 782 aa19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 HSD17B4P51659 736 aa19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 CCNA1P78396 465 aa19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 RESTQ13127 1097 aa19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 NR5A1Q13285 461 aa19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 REXO1Q8N1G1 1221 aaKnown RBP19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 MROH8Q9H579 483 aa19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 MAP3K20Q9NYL2 800 aaKnown RBP19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 CPA4Q9UI42 421 aa19.02■□□□□ 0.64
CCDC90B-202ENST00000455220 F13A1P00488 732 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 313.8 ms